Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ANP32BP2-201ENST00000454525 545 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.73□□□□□ -1.81
XRCC1P18887 AL133162.1-201ENST00000463228 453 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
XRCC1P18887 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.73□□□□□ -1.81
XRCC1P18887 NIPA2P2-201ENST00000496376 1083 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC008802.1-201ENST00000519121 791 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XRCC1P18887 OR4C2P-201ENST00000530855 1064 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC074029.1-201ENST00000552531 1044 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC087499.8-201ENST00000578406 226 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 MIR5187-201ENST00000583479 76 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC067852.4-201ENST00000590314 478 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XRCC1P18887 AC069304.3-201ENST00000603938 1084 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC021851.1-201ENST00000608537 1082 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC112503.2-201ENST00000609005 552 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AL121772.2-201ENST00000614331 297 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 MIR6864-201ENST00000617935 70 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 C2orf27A-204ENST00000623058 969 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC093875.1-201ENST00000623688 504 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC092608.3-201ENST00000625017 386 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AL590396.2-201ENST00000636511 1041 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 OR6C71P-202ENST00000641886 1107 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.73□□□□□ -1.81
XRCC1P18887 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XRCC1P18887 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
XRCC1P18887 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
XRCC1P18887 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.72□□□□□ -1.81
XRCC1P18887 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.72□□□□□ -1.81
XRCC1P18887 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
XRCC1P18887 RNU6-481P-201ENST00000384194 107 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 U8.11-201ENST00000384699 133 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 U8.12-201ENST00000384701 133 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 SNORA40.4-201ENST00000390971 128 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AL391417.1-201ENST00000404100 426 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 RAB9AP3-201ENST00000412737 573 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.72□□□□□ -1.81
XRCC1P18887 AC127526.1-201ENST00000417526 366 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.72□□□□□ -1.81
XRCC1P18887 AL512637.2-201ENST00000431287 1256 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.72□□□□□ -1.81
XRCC1P18887 USP9YP7-201ENST00000436723 430 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC044797.1-201ENST00000445744 679 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 RAB9AP1-201ENST00000449393 573 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 USP9YP32-201ENST00000452432 430 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.72□□□□□ -1.81
XRCC1P18887 U8.18-201ENST00000459285 133 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 ACTR3P3-201ENST00000480448 893 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 MTATP6P22-201ENST00000507369 598 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.72□□□□□ -1.81
XRCC1P18887 NDUFB4P9-201ENST00000511646 388 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.72□□□□□ -1.81
XRCC1P18887 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
XRCC1P18887 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.72□□□□□ -1.81
XRCC1P18887 MIR4458-201ENST00000578872 75 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC098483.2-201ENST00000603158 454 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC120053.1-201ENST00000607706 736 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC018926.3-201ENST00000618841 406 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 AC012442.3-202ENST00000636742 206 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
XRCC1P18887 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XRCC1P18887 MTCO1P6-201ENST00000481192 1384 ntBASIC3.72□□□□□ -1.81
XRCC1P18887 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
XRCC1P18887 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.72□□□□□ -1.81
XRCC1P18887 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
XRCC1P18887 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.71□□□□□ -1.82
XRCC1P18887 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 MIR525-201ENST00000384978 85 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 ATP5F1P3-201ENST00000397213 657 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.71□□□□□ -1.82
XRCC1P18887 SNORA11C-201ENST00000408532 129 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.71□□□□□ -1.82
XRCC1P18887 AL445183.3-201ENST00000414168 502 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC114814.2-201ENST00000419195 485 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 RPL37P1-201ENST00000432310 284 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 BMS1P19-201ENST00000433925 393 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.71□□□□□ -1.82
XRCC1P18887 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 HMGB1P48-201ENST00000446155 598 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 MRPL35P4-201ENST00000453682 566 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC091564.1-201ENST00000464563 479 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms