Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD8P13378 AC137627.1-201ENST00000545761 289 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXD8P13378 BNIP3P6-201ENST00000549284 499 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXD8P13378 FRG2DP-202ENST00000566967 323 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXD8P13378 AC008687.2-201ENST00000597865 520 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 RPSAP73-201ENST00000614820 330 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AC009318.4-201ENST00000620496 486 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 AC040168.1-201ENST00000623594 991 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 OR2L1P-202ENST00000641567 1023 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 ZNF652P1-201ENST00000442420 1309 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXD8P13378 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD8P13378 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD8P13378 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXD8P13378 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXD8P13378 AC092447.10-201ENST00000620607 1652 ntBASIC6.14□□□□□ -1.43
HOXD8P13378 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 Y_RNA.255-201ENST00000364581 97 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 RNU6-108P-201ENST00000365558 107 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 MIR585-201ENST00000384887 94 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 U3.23-201ENST00000391132 200 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
HOXD8P13378 RNU6-1148P-201ENST00000410992 104 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AL451054.2-201ENST00000420896 202 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD8P13378 RPS15AP9-201ENST00000439856 381 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 CACYBPP2-201ENST00000453625 678 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AL645937.3-201ENST00000453647 936 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 RNU6-329P-201ENST00000459618 107 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD8P13378 AL163540.1-201ENST00000485382 386 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC004453.1-201ENST00000487895 408 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD8P13378 RN7SKP99-201ENST00000517028 307 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC022616.3-201ENST00000523940 148 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD8P13378 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD8P13378 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.13□□□□□ -1.43
HOXD8P13378 AC026464.5-201ENST00000562497 722 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD8P13378 AC100830.2-201ENST00000581636 240 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC098848.2-201ENST00000588023 330 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AL121612.2-201ENST00000612261 482 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC084781.2-201ENST00000615568 161 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AL158196.1-201ENST00000616786 434 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC091953.2-201ENST00000623979 160 ntBASIC6.13□□□□□ -1.43
HOXD8P13378 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
HOXD8P13378 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.13□□□□□ -1.43
HOXD8P13378 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD8P13378 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HOXD8P13378 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HOXD8P13378 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 RNU6-196P-201ENST00000384315 107 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HOXD8P13378 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 RPL5P18-201ENST00000406671 891 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 RPL31P52-201ENST00000407532 367 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC096921.1-201ENST00000411661 375 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 PRELID3BP11-201ENST00000414230 479 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC234781.4-201ENST00000419384 244 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD8P13378 AC006548.1-201ENST00000427470 102 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HOXD8P13378 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 AL035551.1-201ENST00000446931 348 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AL389915.2-201ENST00000454576 441 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC006512.1-201ENST00000468816 291 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD8P13378 RPS17P5-201ENST00000498293 408 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC021146.2-201ENST00000504736 556 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms