Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.23□□□□□ -1.57
COL6A2P12110 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 AL356055.1-201ENST00000602528 446 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AL390208.1-201ENST00000605885 644 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 RNU6-87P-201ENST00000607561 108 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 AC104260.1-201ENST00000616660 539 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC012150.2-201ENST00000621300 544 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AL445264.1-201ENST00000621719 171 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 CASC19-221ENST00000641309 1382 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 GNG5P1-201ENST00000255500 204 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL6A2P12110 RNA5SP223-201ENST00000365174 120 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RNU6-780P-201ENST00000391030 104 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 SNORA68.2-201ENST00000391263 128 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL6A2P12110 EIF5P1-201ENST00000400019 1231 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 RPS3AP9-201ENST00000417027 792 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AC104333.2-201ENST00000422630 192 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL589872.1-201ENST00000426602 288 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 ELOCP14-201ENST00000428070 331 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC009238.2-201ENST00000431026 355 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 ARPC3P1-201ENST00000437218 533 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RPL22P17-201ENST00000438729 315 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC098614.3-201ENST00000438957 440 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 ELOCP7-201ENST00000439968 331 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AP000542.1-201ENST00000448473 371 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AL354710.1-201ENST00000453641 246 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RN7SL189P-201ENST00000468631 289 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RBM43P1-201ENST00000476891 1081 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RN7SL214P-201ENST00000487317 265 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AC114967.1-201ENST00000504890 259 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 SNORD46.2-201ENST00000516021 102 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 RNU6-201P-201ENST00000517100 61 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 IGKV3D-34-201ENST00000522638 302 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 AP003034.1-201ENST00000534621 422 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 LSM6P2-201ENST00000552208 177 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.22□□□□□ -1.57
COL6A2P12110 AL390726.5-202ENST00000564800 256 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC010547.6-201ENST00000571789 193 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC233702.9-201ENST00000581528 203 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC005730.3-201ENST00000583067 366 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.22□□□□□ -1.57
COL6A2P12110 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 AC103792.1-201ENST00000603591 919 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AL049634.3-201ENST00000604968 457 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 COX6CP4-201ENST00000605798 228 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 HSPE1P14-201ENST00000605812 302 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.22□□□□□ -1.57
COL6A2P12110 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL6A2P12110 BX005214.3-202ENST00000619809 325 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 AP003122.6-201ENST00000623831 495 ntBASIC5.22□□□□□ -1.57
COL6A2P12110 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL6A2P12110 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.22□□□□□ -1.57
COL6A2P12110 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL6A2P12110 AC112198.2-201ENST00000426589 6996 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COL6A2P12110 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 Y_RNA.1-201ENST00000352915 104 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 Y_RNA.89-201ENST00000363031 102 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 RNU6-534P-201ENST00000364877 106 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms