Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OOSP1P1-201ENST00000423265 274 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.18□□□□□ -1.58
TOP2AP11388 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.18□□□□□ -1.58
TOP2AP11388 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.18□□□□□ -1.58
TOP2AP11388 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.18□□□□□ -1.58
TOP2AP11388 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.18□□□□□ -1.58
TOP2AP11388 RMST_8.1-201ENST00000610287 165 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 AC007318.2-201ENST00000620999 243 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 PLCE1P1-201ENST00000622094 305 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TOP2AP11388 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TOP2AP11388 AC110754.1-201ENST00000399740 601 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 AC087499.2-201ENST00000432861 149 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 AC108078.3-201ENST00000502633 489 ntBASIC5.18□□□□□ -1.58
TOP2AP11388 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TOP2AP11388 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
TOP2AP11388 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC5.17□□□□□ -1.58
TOP2AP11388 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TOP2AP11388 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.17□□□□□ -1.58
TOP2AP11388 AC009263.1-201ENST00000441193 1239 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 DNAJC19P8-201ENST00000452887 259 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 AC128713.1-201ENST00000471495 306 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.17□□□□□ -1.58
TOP2AP11388 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.17□□□□□ -1.58
TOP2AP11388 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.17□□□□□ -1.58
TOP2AP11388 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.17□□□□□ -1.58
TOP2AP11388 AL049874.4-201ENST00000557593 255 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 MIR4425-201ENST00000580572 84 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.17□□□□□ -1.58
TOP2AP11388 AC067852.4-201ENST00000590314 478 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 OR6R2P-201ENST00000609216 300 ntBASIC5.17□□□□□ -1.58
TOP2AP11388 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.17□□□□□ -1.58
TOP2AP11388 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TOP2AP11388 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.17□□□□□ -1.58
TOP2AP11388 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TOP2AP11388 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TOP2AP11388 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TOP2AP11388 HMGN1P18-201ENST00000457642 277 ntBASIC5.16□□□□□ -1.58
TOP2AP11388 AL035404.1-201ENST00000497982 568 ntBASIC5.16□□□□□ -1.58
TOP2AP11388 AC114967.1-201ENST00000504890 259 ntBASIC5.16□□□□□ -1.58
TOP2AP11388 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.16□□□□□ -1.58
TOP2AP11388 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.16□□□□□ -1.58
TOP2AP11388 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.16□□□□□ -1.58
TOP2AP11388 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.16□□□□□ -1.58
TOP2AP11388 AC096947.1-201ENST00000603233 470 ntBASIC5.16□□□□□ -1.58
TOP2AP11388 AC022509.4-201ENST00000621404 572 ntBASIC5.16□□□□□ -1.58
TOP2AP11388 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TOP2AP11388 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOP2AP11388 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOP2AP11388 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.15□□□□□ -1.58
TOP2AP11388 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TOP2AP11388 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.15□□□□□ -1.58
TOP2AP11388 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.15□□□□□ -1.58
TOP2AP11388 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TOP2AP11388 OR6C64P-201ENST00000419708 825 ntBASIC5.15□□□□□ -1.58
TOP2AP11388 AC063976.3-201ENST00000426849 329 ntBASIC5.15□□□□□ -1.58
TOP2AP11388 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.15□□□□□ -1.58
TOP2AP11388 AC010486.1-201ENST00000511793 424 ntBASIC5.15□□□□□ -1.58
TOP2AP11388 RNU4-29P-201ENST00000515943 174 ntBASIC5.15□□□□□ -1.58
TOP2AP11388 AC103783.1-201ENST00000520506 373 ntBASIC5.15□□□□□ -1.58
TOP2AP11388 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.15□□□□□ -1.58
TOP2AP11388 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.15□□□□□ -1.58
TOP2AP11388 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TOP2AP11388 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TOP2AP11388 AC027287.1-201ENST00000553115 1453 ntBASIC5.15□□□□□ -1.59
TOP2AP11388 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TOP2AP11388 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TOP2AP11388 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.14□□□□□ -1.59
TOP2AP11388 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.14□□□□□ -1.59
TOP2AP11388 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.14□□□□□ -1.59
TOP2AP11388 AC093755.1-201ENST00000512950 1023 ntBASIC5.14□□□□□ -1.59
TOP2AP11388 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.14□□□□□ -1.59
TOP2AP11388 AC141257.3-201ENST00000572906 215 ntBASIC5.14□□□□□ -1.59
TOP2AP11388 AC138761.3-201ENST00000579993 334 ntBASIC5.14□□□□□ -1.59
TOP2AP11388 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.14□□□□□ -1.59
TOP2AP11388 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.14□□□□□ -1.59
TOP2AP11388 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
TOP2AP11388 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TOP2AP11388 MIR9-1-201ENST00000385198 89 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 AL360182.1-201ENST00000397433 468 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL21P40-201ENST00000428586 483 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.13□□□□□ -1.59
TOP2AP11388 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.13□□□□□ -1.59
TOP2AP11388 SNORD109B-201ENST00000458961 67 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 SNORD109A-201ENST00000459128 67 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL31P13-201ENST00000484151 370 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TOP2AP11388 AC022882.1-201ENST00000532142 501 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 MIR5047-201ENST00000579212 100 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL23AP92-201ENST00000603609 255 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.13□□□□□ -1.59
TOP2AP11388 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TOP2AP11388 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TOP2AP11388 LAP3P1-201ENST00000403648 294 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 U3.42-201ENST00000408746 214 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL30P2-201ENST00000414021 291 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL32P28-201ENST00000443577 397 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RPL7P36-201ENST00000444633 681 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RNA5SP217-201ENST00000515959 91 ntBASIC5.13□□□□□ -1.59
TOP2AP11388 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms