Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC121761.2-201ENST00000617300 689 ntBASIC4.15□□□□□ -1.75
TOP1P11387 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TOP1P11387 AC244100.1-202ENST00000621554 382 ntBASIC4.15□□□□□ -1.75
TOP1P11387 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.15□□□□□ -1.75
TOP1P11387 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TOP1P11387 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TOP1P11387 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.15□□□□□ -1.75
TOP1P11387 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TOP1P11387 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TOP1P11387 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP1P11387 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP1P11387 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TOP1P11387 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP1P11387 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP1P11387 PTP4A1P5-201ENST00000420305 455 ntBASIC4.14□□□□□ -1.75
TOP1P11387 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP1P11387 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP1P11387 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.14□□□□□ -1.75
TOP1P11387 XKRYP6-201ENST00000440468 1116 ntBASIC4.14□□□□□ -1.75
TOP1P11387 XKRYP3-201ENST00000442113 1116 ntBASIC4.14□□□□□ -1.75
TOP1P11387 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP1P11387 TPTE2P6-202ENST00000445572 1007 ntBASIC4.14□□□□□ -1.75
TOP1P11387 ANP32BP2-201ENST00000454525 545 ntBASIC4.14□□□□□ -1.75
TOP1P11387 RPS20P32-201ENST00000456044 356 ntBASIC4.14□□□□□ -1.75
TOP1P11387 U3.44-201ENST00000458938 192 ntBASIC4.14□□□□□ -1.75
TOP1P11387 TMED11P-201ENST00000479478 690 ntBASIC4.14□□□□□ -1.75
TOP1P11387 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP1P11387 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.14□□□□□ -1.75
TOP1P11387 AP000926.4-201ENST00000527351 454 ntBASIC4.14□□□□□ -1.75
TOP1P11387 AP004242.1-201ENST00000533701 349 ntBASIC4.14□□□□□ -1.75
TOP1P11387 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP1P11387 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP1P11387 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP1P11387 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.14□□□□□ -1.75
TOP1P11387 AC069200.1-201ENST00000609511 323 ntBASIC4.14□□□□□ -1.75
TOP1P11387 RNVU1-4-201ENST00000612985 164 ntBASIC4.14□□□□□ -1.75
TOP1P11387 U4.6-201ENST00000621618 127 ntBASIC4.14□□□□□ -1.75
TOP1P11387 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.14□□□□□ -1.75
TOP1P11387 U6.105-201ENST00000637379 88 ntBASIC4.14□□□□□ -1.75
TOP1P11387 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.14□□□□□ -1.75
TOP1P11387 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP1P11387 AC073073.2-201ENST00000609827 2578 ntBASIC4.13□□□□□ -1.75
TOP1P11387 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP1P11387 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP1P11387 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP1P11387 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 RNU4-74P-201ENST00000411280 161 ntBASIC4.13□□□□□ -1.75
TOP1P11387 RN7SKP53-201ENST00000411337 315 ntBASIC4.13□□□□□ -1.75
TOP1P11387 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 AC068533.1-201ENST00000418542 415 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 AL159987.2-201ENST00000432754 307 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP1P11387 PRDX3P3-201ENST00000447765 522 ntBASIC4.13□□□□□ -1.75
TOP1P11387 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 AC023598.1-201ENST00000472521 361 ntBASIC4.13□□□□□ -1.75
TOP1P11387 NPM1P17-201ENST00000479221 602 ntBASIC4.13□□□□□ -1.75
TOP1P11387 RPL23AP73-201ENST00000492507 471 ntBASIC4.13□□□□□ -1.75
TOP1P11387 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP1P11387 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.13□□□□□ -1.75
TOP1P11387 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP1P11387 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.13□□□□□ -1.75
TOP1P11387 AC007458.1-201ENST00000542812 373 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.13□□□□□ -1.75
TOP1P11387 AC074029.1-201ENST00000552531 1044 ntBASIC4.13□□□□□ -1.75
TOP1P11387 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
TOP1P11387 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 AC020658.4-201ENST00000613987 684 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AC012314.7-201ENST00000619693 93 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AC004777.1-201ENST00000624317 287 ntBASIC4.13□□□□□ -1.75
TOP1P11387 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TOP1P11387 AL133383.2-201ENST00000622958 2336 ntBASIC4.13□□□□□ -1.75
TOP1P11387 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP1P11387 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TOP1P11387 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 MTND5P3-201ENST00000438536 1800 ntBASIC4.12□□□□□ -1.75
TOP1P11387 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TOP1P11387 SNORA63.1-201ENST00000362493 131 ntBASIC4.12□□□□□ -1.75
TOP1P11387 DHFRP5-201ENST00000406944 564 ntBASIC4.12□□□□□ -1.75
TOP1P11387 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
TOP1P11387 RNU2-37P-201ENST00000410695 177 ntBASIC4.12□□□□□ -1.75
TOP1P11387 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP1P11387 AC006989.1-201ENST00000427212 131 ntBASIC4.12□□□□□ -1.75
TOP1P11387 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP1P11387 AL035458.1-201ENST00000433096 585 ntBASIC4.12□□□□□ -1.75
TOP1P11387 MRPS18BP2-201ENST00000434310 759 ntBASIC4.12□□□□□ -1.75
TOP1P11387 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP1P11387 RN7SL594P-201ENST00000470590 287 ntBASIC4.12□□□□□ -1.75
TOP1P11387 RPS3AP50-201ENST00000487064 803 ntBASIC4.12□□□□□ -1.75
TOP1P11387 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 AC025459.1-201ENST00000504072 156 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms