Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RPS4XP22-201ENST00000480755 780 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 RNA5SP458-201ENST00000516188 119 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 AC093524.1-201ENST00000564266 1094 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.85□□□□□ -1.95
SPTA1P02549 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.85□□□□□ -1.95
SPTA1P02549 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
SPTA1P02549 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.85□□□□□ -1.95
SPTA1P02549 Y_RNA.508-201ENST00000384502 114 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 SNORD15B-201ENST00000384714 146 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 GSTM3P2-201ENST00000412746 530 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.85□□□□□ -1.95
SPTA1P02549 RNA5SP445-201ENST00000515889 115 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AP006245.1-201ENST00000522549 120 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.85□□□□□ -1.95
SPTA1P02549 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SPTA1P02549 AC080128.1-201ENST00000474389 1917 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AC117440.1-201ENST00000474107 571 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 RPS29P26-201ENST00000477483 171 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 OR4C2P-201ENST00000530855 1064 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.84□□□□□ -1.95
SPTA1P02549 AC008638.3-201ENST00000603341 463 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 AC026634.1-201ENST00000634369 198 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.84□□□□□ -1.95
SPTA1P02549 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SPTA1P02549 Y_RNA.355-201ENST00000365462 98 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 MIR764-201ENST00000390811 85 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 IFNNP1-201ENST00000429219 553 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.84□□□□□ -1.95
SPTA1P02549 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.84□□□□□ -1.95
SPTA1P02549 COX6CP8-201ENST00000522620 226 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 AP003122.3-201ENST00000526316 255 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 AC020914.4-201ENST00000597690 277 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 AC007619.2-201ENST00000605743 379 ntBASIC2.84□□□□□ -1.95
SPTA1P02549 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.84□□□□□ -1.96
SPTA1P02549 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SPTA1P02549 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SPTA1P02549 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.84□□□□□ -1.96
SPTA1P02549 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
SPTA1P02549 ASNSP1-201ENST00000518311 1939 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 AL356968.1-201ENST00000416622 474 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 AC084357.1-201ENST00000473404 255 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SPTA1P02549 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.83□□□□□ -1.96
SPTA1P02549 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 MIR4727-201ENST00000622232 55 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SPTA1P02549 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SPTA1P02549 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.83□□□□□ -1.96
SPTA1P02549 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 OR5BR1P-201ENST00000524992 1330 ntBASIC2.83□□□□□ -1.96
SPTA1P02549 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.83□□□□□ -1.96
SPTA1P02549 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SPTA1P02549 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SPTA1P02549 JKAMPP1-201ENST00000413804 919 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 MTCO1P39-201ENST00000426148 480 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
SPTA1P02549 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.82□□□□□ -1.96
SPTA1P02549 RN7SKP209-201ENST00000516888 304 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 KCTD9P6-201ENST00000522306 950 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AC010306.1-201ENST00000523223 1117 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 OR11H5P-201ENST00000554039 926 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AC018552.3-201ENST00000567416 561 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AL669942.2-201ENST00000620352 697 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.82□□□□□ -1.96
SPTA1P02549 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SPTA1P02549 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SPTA1P02549 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.82□□□□□ -1.96
SPTA1P02549 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
SPTA1P02549 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.82□□□□□ -1.96
SPTA1P02549 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SPTA1P02549 AC007496.3-201ENST00000624987 3443 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AL136116.1-201ENST00000403591 381 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 RPL23AP36-201ENST00000413895 458 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AL662791.1-201ENST00000441992 928 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 AC016696.1-201ENST00000446949 318 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.82□□□□□ -1.96
SPTA1P02549 RN7SKP116-201ENST00000516902 319 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 TRAV37-201ENST00000553906 342 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 MIR4648-201ENST00000580107 72 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms