Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TNFP01375 RPL23AP57-201ENST00000332361 466 ntBASIC3.12□□□□□ -1.91
TNFP01375 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AC009237.5-201ENST00000414271 501 ntBASIC3.12□□□□□ -1.91
TNFP01375 OR4K6P-201ENST00000416478 897 ntBASIC3.12□□□□□ -1.91
TNFP01375 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFP01375 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AP002404.1-201ENST00000532005 451 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AC087888.1-201ENST00000550884 1254 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFP01375 AF131215.7-201ENST00000602443 707 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC103710.3-201ENST00000608157 948 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC116447.1-201ENST00000613153 453 ntBASIC3.12□□□□□ -1.91
TNFP01375 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
TNFP01375 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
TNFP01375 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFP01375 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFP01375 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFP01375 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TNFP01375 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFP01375 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
TNFP01375 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
TNFP01375 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFP01375 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
TNFP01375 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
TNFP01375 SNORA7.4-201ENST00000384249 137 ntBASIC3.11□□□□□ -1.91
TNFP01375 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
TNFP01375 RNU6-328P-201ENST00000390887 106 ntBASIC3.11□□□□□ -1.91
TNFP01375 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFP01375 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFP01375 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.11□□□□□ -1.91
TNFP01375 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
TNFP01375 HMGB1P5-202ENST00000451497 985 ntBASIC3.11□□□□□ -1.91
TNFP01375 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
TNFP01375 AL136097.1-201ENST00000456945 913 ntBASIC3.11□□□□□ -1.91
TNFP01375 AC021205.2-201ENST00000480069 347 ntBASIC3.11□□□□□ -1.91
TNFP01375 PCBP2P3-201ENST00000509726 843 ntBASIC3.11□□□□□ -1.91
TNFP01375 PTGES3P3-201ENST00000511479 482 ntBASIC3.11□□□□□ -1.91
TNFP01375 Vault.1-201ENST00000516474 102 ntBASIC3.11□□□□□ -1.91
TNFP01375 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
TNFP01375 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFP01375 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFP01375 MIR4425-201ENST00000580572 84 ntBASIC3.11□□□□□ -1.91
TNFP01375 UBL5P2-201ENST00000583788 219 ntBASIC3.11□□□□□ -1.91
TNFP01375 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFP01375 AC018816.2-201ENST00000621460 353 ntBASIC3.11□□□□□ -1.91
TNFP01375 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
TNFP01375 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFP01375 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFP01375 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TNFP01375 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
TNFP01375 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFP01375 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFP01375 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TNFP01375 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFP01375 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFP01375 MIR634-201ENST00000385208 97 ntBASIC3.1□□□□□ -1.91
TNFP01375 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
TNFP01375 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
TNFP01375 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFP01375 PTP4A1P5-201ENST00000420305 455 ntBASIC3.1□□□□□ -1.91
TNFP01375 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
TNFP01375 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 RPL9P32-201ENST00000464118 620 ntBASIC3.1□□□□□ -1.91
TNFP01375 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFP01375 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
TNFP01375 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFP01375 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFP01375 AC006539.2-201ENST00000601729 572 ntBASIC3.1□□□□□ -1.91
TNFP01375 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TNFP01375 AC091903.1-201ENST00000624322 454 ntBASIC3.1□□□□□ -1.91
TNFP01375 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFP01375 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
TNFP01375 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.1□□□□□ -1.91
TNFP01375 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TNFP01375 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
TNFP01375 AL445437.1-201ENST00000623157 3087 ntBASIC3.09□□□□□ -1.91
TNFP01375 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFP01375 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
TNFP01375 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TNFP01375 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms