Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SYF2P2-201ENST00000417620 583 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC006946.1-201ENST00000429106 328 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 HMGN2P31-201ENST00000432430 273 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 HMGB1P45-201ENST00000435986 653 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL12P46-201ENST00000436610 195 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AL645939.1-201ENST00000453429 797 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL37P3-201ENST00000456825 293 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL7L1P8-201ENST00000469911 741 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC092045.1-201ENST00000495716 1231 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RAC1P2-201ENST00000511164 579 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC008562.1-201ENST00000521763 330 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 IGKV2D-19-201ENST00000523346 262 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010735.1-201ENST00000567305 1026 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 EIF1P6-201ENST00000600054 334 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 NTAN1P1-201ENST00000603150 646 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC004808.1-201ENST00000627671 721 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 NSRP1P1-201ENST00000444067 1693 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC022031.1-201ENST00000585985 2593 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RNA5SP119-201ENST00000362715 117 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL7P60-201ENST00000397636 735 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RNA5SP239-201ENST00000410218 129 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RNA5SP44-201ENST00000410446 133 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC096533.1-201ENST00000411645 353 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RPS3AP25-201ENST00000411660 793 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RPS29P4-201ENST00000414733 161 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC093578.1-201ENST00000415219 368 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC246680.2-201ENST00000422106 389 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC005002.1-201ENST00000447458 540 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC239809.1-201ENST00000450470 217 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 MRPL35P4-201ENST00000453682 566 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL21P71-201ENST00000465598 459 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC106872.2-201ENST00000494303 480 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC108941.1-201ENST00000502853 530 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC119751.4-201ENST00000507498 357 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC104108.1-201ENST00000509930 412 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 PRELID3BP4-201ENST00000515476 571 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RN7SKP18-201ENST00000516005 275 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 RN7SKP283-201ENST00000517197 270 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 IGHV3-32-201ENST00000519182 355 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC139103.1-201ENST00000534696 1030 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC006518.1-201ENST00000541449 943 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 CYB5AP5-201ENST00000549779 389 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AL360157.1-201ENST00000565962 87 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AP000919.1-202ENST00000581139 1264 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR3944-201ENST00000581277 108 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 BNIP3P4-201ENST00000604946 565 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC013468.1-201ENST00000608680 598 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC069200.1-201ENST00000609511 323 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 uc_338.32-201ENST00000615087 172 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC022079.2-201ENST00000619739 566 ntBASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.86□□□□□ -1.79
NEDD8-MDP1E9PL57 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms