Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC034244.1-201ENST00000507687 207 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC093824.1-201ENST00000508796 343 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC018797.3-201ENST00000513388 1241 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC090695.1-201ENST00000561269 1222 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC021171.1-201ENST00000603137 706 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL353778.1-201ENST00000603149 408 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AL139286.1-201ENST00000604465 483 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC009948.4-201ENST00000604692 675 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 OR6R2P-201ENST00000609216 300 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 MIR6867-201ENST00000610636 67 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC091304.6-201ENST00000619761 202 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 AC112484.5-201ENST00000624189 228 ntBASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SNX9Q9Y5X1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC090229.1-201ENST00000590983 1609 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 MTCO1P6-201ENST00000481192 1384 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC000367.1-201ENST00000452711 1766 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 RNU6-83P-201ENST00000384568 112 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 OR8G2P-201ENST00000412796 908 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 RPF2P1-201ENST00000424137 906 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 TXNL1P1-201ENST00000429528 554 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC006011.1-201ENST00000442758 349 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 PRDX3P4-201ENST00000470828 747 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC091959.2-201ENST00000477363 321 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC069528.1-202ENST00000482888 637 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC104108.1-201ENST00000509930 412 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 RNU6-416P-201ENST00000516265 103 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 RN7SKP21-201ENST00000516503 220 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 MIR2116-201ENST00000517221 80 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 HMGB1P1-201ENST00000522557 636 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC007834.2-201ENST00000536310 343 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 OSBPL9P5-201ENST00000542581 171 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 POLR2KP1-201ENST00000553226 168 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AL161713.1-201ENST00000555538 145 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AP001269.3-201ENST00000588718 329 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AP000255.1-201ENST00000610276 676 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC024257.5-201ENST00000612739 531 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 AC100871.1-201ENST00000507871 1456 ntBASIC4.43□□□□□ -1.7
SNX9Q9Y5X1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AL353743.4-201ENST00000422653 1547 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 SPRR2C-201ENST00000290702 219 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 RNA5SP479-201ENST00000364858 117 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 ENSAP1-201ENST00000392855 326 ntBASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX9Q9Y5X1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms