Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSX2IPQ9Y2D8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SSX2IPQ9Y2D8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RAD17P1-201ENST00000418130 2042 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC096656.1-201ENST00000623826 1364 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RNU6-1066P-201ENST00000363573 105 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RNA5SP509-201ENST00000364577 119 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 HSPD1P16-201ENST00000402302 394 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AL121834.1-202ENST00000404494 277 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RNU2-42P-201ENST00000410697 113 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RNU6-920P-201ENST00000410926 92 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RPS15AP38-201ENST00000413110 372 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AL356387.2-201ENST00000422272 243 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC234779.1-201ENST00000425910 285 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 MTCO3P21-201ENST00000430791 643 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 MTCYBP39-201ENST00000437562 491 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 TAF9P1-201ENST00000445421 515 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 COX6CP18-201ENST00000448769 222 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RPL12P26-201ENST00000452430 487 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC009963.2-201ENST00000453431 138 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 TAF9P2-201ENST00000454958 515 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC011276.1-201ENST00000469688 323 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC015724.1-201ENST00000478577 156 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC112198.1-201ENST00000505369 1220 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 MTATP6P22-201ENST00000507369 598 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC007016.1-201ENST00000512110 244 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC012213.3-201ENST00000577199 777 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC115286.1-201ENST00000604298 434 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC018714.1-201ENST00000605028 208 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC073348.1-201ENST00000623002 331 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC119744.1-201ENST00000454746 1715 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 AC074029.4-201ENST00000624796 1859 ntBASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SSX2IPQ9Y2D8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC092079.1-201ENST00000558620 1985 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 MTCO3P30-201ENST00000426425 670 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC011998.1-201ENST00000433403 117 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 MUPP-201ENST00000438111 566 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 FHP1-201ENST00000442741 703 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AL162388.1-201ENST00000450912 352 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 RPL7AP28-201ENST00000464513 571 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 NCOR1P1-202ENST00000486162 291 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC010285.3-201ENST00000511668 676 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 RN7SKP31-201ENST00000516354 278 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 RN7SKP283-201ENST00000517197 270 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 NDUFA5P2-201ENST00000519723 344 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC008562.1-201ENST00000521763 330 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC020910.2-201ENST00000603635 610 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AL390816.3-201ENST00000604527 1066 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC112220.3-201ENST00000605502 502 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC090948.1-201ENST00000607464 549 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 CDRT1-208ENST00000630868 794 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC127502.3-201ENST00000636170 1206 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms