Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RPL36P19-201ENST00000430744 301 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RAB9AP1-201ENST00000449393 573 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AL096803.2-201ENST00000450032 677 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RPL31P61-201ENST00000496160 376 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC008628.1-201ENST00000508663 265 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 PTGES3P3-201ENST00000511479 482 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC093853.1-201ENST00000515689 483 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 RNU6-202P-201ENST00000515998 96 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 PAICSP4-201ENST00000517543 1253 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 MTND1P6-201ENST00000523621 946 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AGGF1P8-201ENST00000562979 1000 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC023824.3-201ENST00000569003 562 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AL139395.1-201ENST00000603662 160 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AC244100.1-202ENST00000621554 382 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 AL356118.1-201ENST00000635272 1078 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 MIR4496-201ENST00000635896 61 ntBASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NPIPA1Q9UND3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPIPA1Q9UND3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPIPA1Q9UND3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.84
NPIPA1Q9UND3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 SNORA71.3-201ENST00000362582 128 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 Y_RNA.110-201ENST00000363220 99 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC246680.2-201ENST00000422106 389 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 MTCO2P1-201ENST00000424648 477 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AL513175.1-201ENST00000431492 780 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RPL21P110-201ENST00000433345 446 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 PPIAP3-201ENST00000450588 505 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 ANP32BP2-201ENST00000454525 545 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RPL7P15-201ENST00000461190 712 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 SETP6-201ENST00000479329 568 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC092851.1-201ENST00000535964 478 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RN7SL622P-201ENST00000585292 275 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RNA5SP108-201ENST00000605921 117 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC005344.1-201ENST00000613391 459 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 MIR4727-201ENST00000622232 55 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC004777.1-201ENST00000624317 287 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC106730.3-201ENST00000624568 641 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 AC107081.3-201ENST00000612715 2034 ntBASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA1Q9UND3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 RNA5SP399-201ENST00000364003 117 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 RNU6-609P-201ENST00000365459 107 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 RNU6-356P-201ENST00000384140 107 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 AL138878.1-201ENST00000405131 347 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 SNORA3.3-201ENST00000408712 125 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 BX664727.1-201ENST00000416024 466 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 CKS1BP5-201ENST00000434172 273 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 USP9YP7-201ENST00000436723 430 ntBASIC3.57□□□□□ -1.84
NPIPA1Q9UND3 AP004289.2-201ENST00000444413 1457 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms