Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC023157.2-201ENST00000540596 141 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC006512.2-201ENST00000543250 486 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MIR3910-1-201ENST00000580936 111 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC062022.1-201ENST00000451026 1684 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 AC092692.1-201ENST00000623625 2595 ntBASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
CUEDC1Q9NWM3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RNU1-115P-201ENST00000365329 160 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RNU1-84P-201ENST00000365447 164 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-744P-201ENST00000365557 107 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-1316P-201ENST00000384242 108 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.493-201ENST00000384422 102 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 OR6C66P-201ENST00000414917 930 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RPS15AP12-201ENST00000419498 388 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RPL7L1P10-201ENST00000427790 463 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 GSTA11P-201ENST00000452866 669 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RPL7L1P8-201ENST00000469911 741 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RN7SL413P-201ENST00000482700 297 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RPL23AP41-201ENST00000484754 458 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC011005.3-201ENST00000491624 395 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 TMEM251P1-201ENST00000503717 318 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC018797.1-201ENST00000510791 255 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AP005435.4-201ENST00000529514 284 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC004805.3-201ENST00000603178 310 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AL355297.3-201ENST00000604082 446 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC011890.2-201ENST00000613393 294 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 MIR6729-201ENST00000618194 65 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC008013.2-202ENST00000637965 364 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC010325.3-201ENST00000641084 394 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AL451142.2-201ENST00000429076 2090 ntBASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUEDC1Q9NWM3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 ZNF734P-201ENST00000419494 1534 ntBASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CUEDC1Q9NWM3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms