Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTNAP3Q9BZ76 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 PPIAP22-201ENST00000358455 498 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNA5SP110-201ENST00000362638 115 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 SNORA38B-201ENST00000363524 131 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RN7SKP174-201ENST00000363803 330 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNU1-24P-201ENST00000364285 165 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNU6-338P-201ENST00000383888 105 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNU6-378P-201ENST00000384324 107 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RPL7P60-201ENST00000397636 735 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RN7SKP271-201ENST00000410528 320 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC108032.1-201ENST00000416706 207 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RPS20P5-201ENST00000434808 360 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RPL7P28-201ENST00000437739 740 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC020550.1-201ENST00000447385 163 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC026410.2-201ENST00000460281 156 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC104563.1-201ENST00000476147 376 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC004453.1-201ENST00000487895 408 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.654-201ENST00000497848 106 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC114801.2-201ENST00000503825 781 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC108471.1-201ENST00000513977 287 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNU6-1016P-201ENST00000516689 94 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 RNA5SP337-201ENST00000517007 109 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 HSPE1P20-201ENST00000538133 289 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC068993.1-201ENST00000546724 589 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 HMGB2P1-201ENST00000591146 634 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AL035410.2-201ENST00000604963 864 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 MTND4LP5-201ENST00000605152 292 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 PISRT1.1-201ENST00000616930 107 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 CR381572.1-201ENST00000625098 102 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AL606534.2-204ENST00000635008 178 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 U6.104-201ENST00000637979 90 ntBASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CNTNAP3Q9BZ76 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AL022323.4-201ENST00000623980 13120 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 CUBNP3-201ENST00000457461 1784 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 AC011978.2-201ENST00000569835 2054 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.214-201ENST00000364201 112 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.297-201ENST00000364950 91 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 Y_RNA.539-201ENST00000384635 107 ntBASIC6.16□□□□□ -1.42
CNTNAP3Q9BZ76 RNU2-71P-201ENST00000411395 189 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms