Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC093663.1-201ENST00000497190 394 ntBASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 NDUFB9P3-201ENST00000521269 501 ntBASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 NCAPGP2-201ENST00000557911 754 ntBASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 MIR4425-201ENST00000580572 84 ntBASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 AC116447.1-201ENST00000613153 453 ntBASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPAP1Q9BWH6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 TNPO1P3-201ENST00000436471 2662 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 SNORD17-201ENST00000390930 237 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AL035458.1-201ENST00000433096 585 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AP002345.1-201ENST00000456493 928 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 HMGB1P47-201ENST00000511281 589 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AC068446.3-201ENST00000555285 382 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AC245128.3-201ENST00000594721 748 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 YPEL5P2-201ENST00000605553 359 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AL391834.1-201ENST00000609609 560 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AL592295.2-201ENST00000612578 206 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 AC010329.2-201ENST00000595195 2737 ntBASIC4.23□□□□□ -1.73
RPAP1Q9BWH6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 RNU6-31P-201ENST00000384388 108 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 MTND4P22-201ENST00000413116 1169 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 HSFY4P-201ENST00000415994 1181 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC048351.1-201ENST00000420064 602 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC017083.1-201ENST00000428093 483 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 FTH1P6-201ENST00000430768 320 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC073522.1-201ENST00000483312 377 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 RNU1-103P-201ENST00000516502 125 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AL139174.1-201ENST00000531489 886 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC026333.2-201ENST00000542164 106 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC012493.2-201ENST00000595083 291 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AC135803.1-201ENST00000608748 565 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 ZNF833P-201ENST00000424938 1494 ntBASIC4.22□□□□□ -1.73
RPAP1Q9BWH6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
RPAP1Q9BWH6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RNU6-304P-201ENST00000364855 107 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RNA5SP235-201ENST00000365411 114 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AL445528.1-201ENST00000426330 420 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RPS20P1-201ENST00000434853 354 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AC245517.2-201ENST00000442890 346 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AL645939.1-201ENST00000453429 797 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RPL21P10-201ENST00000463521 490 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 RPL6P9-201ENST00000466502 859 ntBASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.21□□□□□ -1.74
RPAP1Q9BWH6 FTH1P9-201ENST00000513251 355 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms