Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.5□□□□□ -1.69
USP47Q96K76 AC006518.1-201ENST00000541449 943 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.5□□□□□ -1.69
USP47Q96K76 CD24P2-201ENST00000565486 219 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 AL451007.1-201ENST00000595491 289 ntBASIC4.5□□□□□ -1.69
USP47Q96K76 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP47Q96K76 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP47Q96K76 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
USP47Q96K76 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.49□□□□□ -1.69
USP47Q96K76 OR10AB1P-202ENST00000641219 1686 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP47Q96K76 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP47Q96K76 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 SNORA7.4-201ENST00000384249 137 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.49□□□□□ -1.69
USP47Q96K76 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.49□□□□□ -1.69
USP47Q96K76 AL450263.2-201ENST00000439400 589 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 RAB28P3-201ENST00000448325 597 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 AC069306.1-201ENST00000507006 843 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.49□□□□□ -1.69
USP47Q96K76 HIGD1AP3-201ENST00000515857 278 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 RNA5SP341-201ENST00000516261 117 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.49□□□□□ -1.69
USP47Q96K76 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.49□□□□□ -1.69
USP47Q96K76 U7.8-201ENST00000619968 63 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.49□□□□□ -1.69
USP47Q96K76 AC073476.4-201ENST00000628409 72 ntBASIC4.49□□□□□ -1.69
USP47Q96K76 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.49□□□□□ -1.69
USP47Q96K76 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP47Q96K76 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
USP47Q96K76 RNU1-75P-201ENST00000347264 129 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 SNORA54-201ENST00000384281 123 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.48□□□□□ -1.69
USP47Q96K76 AMD1P2-201ENST00000412936 992 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 COTL1P1-201ENST00000422309 375 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.48□□□□□ -1.69
USP47Q96K76 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.48□□□□□ -1.69
USP47Q96K76 AC037198.2-201ENST00000478845 733 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 AC011825.1-201ENST00000484967 388 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 AC108078.3-201ENST00000502633 489 ntBASIC4.48□□□□□ -1.69
USP47Q96K76 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.48□□□□□ -1.69
USP47Q96K76 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.48□□□□□ -1.69
USP47Q96K76 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.48□□□□□ -1.69
USP47Q96K76 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP47Q96K76 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP47Q96K76 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP47Q96K76 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
USP47Q96K76 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USP47Q96K76 SPATA2P1-201ENST00000431223 2055 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 RN7SKP285-201ENST00000410137 318 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.47□□□□□ -1.69
USP47Q96K76 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.47□□□□□ -1.69
USP47Q96K76 BX890604.2-201ENST00000427883 474 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.47□□□□□ -1.69
USP47Q96K76 ELOCP23-201ENST00000452014 332 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 AC006539.3-201ENST00000454258 129 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.47□□□□□ -1.69
USP47Q96K76 PTGES3P3-201ENST00000511479 482 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 FABP5P12-201ENST00000515543 389 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.47□□□□□ -1.69
USP47Q96K76 AC104027.1-201ENST00000521887 300 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.47□□□□□ -1.69
USP47Q96K76 AC006504.3-201ENST00000586818 523 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 AC124312.4-201ENST00000605533 310 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.47□□□□□ -1.69
USP47Q96K76 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
USP47Q96K76 ZNF807-201ENST00000328088 1707 ntBASIC4.47□□□□□ -1.69
USP47Q96K76 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
USP47Q96K76 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP47Q96K76 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
USP47Q96K76 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP47Q96K76 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP47Q96K76 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP47Q96K76 MIR365B-201ENST00000362317 111 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 GSTA8P-201ENST00000404253 637 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 RNU4-47P-201ENST00000410876 114 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.46□□□□□ -1.7
USP47Q96K76 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.46□□□□□ -1.7
USP47Q96K76 AC133473.1-201ENST00000455173 299 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.46□□□□□ -1.7
USP47Q96K76 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.46□□□□□ -1.7
USP47Q96K76 AC096576.1-201ENST00000489014 359 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.46□□□□□ -1.7
USP47Q96K76 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.46□□□□□ -1.7
USP47Q96K76 AL121594.4-201ENST00000556211 1196 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.46□□□□□ -1.7
USP47Q96K76 AC005242.1-201ENST00000585658 438 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.46□□□□□ -1.7
USP47Q96K76 MTCO3P22-201ENST00000603219 784 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms