Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 RNU1-59P-201ENST00000364829 162 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 NPM1P40-201ENST00000412758 733 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC073410.1-201ENST00000435125 589 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AL353748.1-201ENST00000440753 474 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 TRGVB-201ENST00000453257 471 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 HNRNPDLP3-201ENST00000456745 380 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 RN7SL51P-201ENST00000468230 285 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 RPS27P23-201ENST00000487608 251 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC026782.1-201ENST00000512952 449 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 SNORA40.12-201ENST00000516329 111 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 RNU6-1314P-201ENST00000517139 104 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 RPL26P30-202ENST00000602923 645 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 Z84480.1-201ENST00000605131 311 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 U1.25-201ENST00000614085 162 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC009237.17-201ENST00000618111 748 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 U1.34-201ENST00000618578 162 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 U1.31-201ENST00000620022 160 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC026634.1-201ENST00000634369 198 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AL161912.4-201ENST00000623889 2468 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
TRIM41Q8WV44 AC092447.10-201ENST00000620607 1652 ntBASIC9.61□□□□□ -0.87
TRIM41Q8WV44 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 ZNF658B-201ENST00000602828 3408 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC067945.1-201ENST00000342609 618 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 U3.2-201ENST00000362981 210 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 RNU6-1297P-201ENST00000384415 104 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 MTND4LP17-201ENST00000414607 293 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 RPL18P10-201ENST00000425606 538 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 RPL12P17-201ENST00000432393 498 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AURKAPS2-201ENST00000454983 333 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC015724.1-201ENST00000478577 156 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC005741.1-201ENST00000511094 432 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 ZNF705CP-201ENST00000530515 889 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 OR5BN1P-201ENST00000532955 829 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC026464.5-201ENST00000562497 722 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 DPPA3P3-201ENST00000603842 430 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 MFSD8-216ENST00000641147 4009 ntBASIC9.6□□□□□ -0.87
TRIM41Q8WV44 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC9.6□□□□□ -0.87
TRIM41Q8WV44 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC139426.3-201ENST00000605648 2059 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 DMD-211ENST00000378707 7410 ntTSL 5 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 RNU6-1120P-201ENST00000362988 108 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 RNA5SP171-201ENST00000391071 115 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 CD3D-202ENST00000392884 476 ntTSL 2 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 CRIP1P1-201ENST00000427567 185 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AL591212.2-201ENST00000433923 257 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC006335.2-201ENST00000437993 330 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC092809.1-201ENST00000441469 474 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AL583843.1-201ENST00000456070 346 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 RPS23P2-201ENST00000463671 415 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 EIF4EP3-201ENST00000498782 656 ntBASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.59□□□□□ -0.87
TRIM41Q8WV44 AC006499.2-201ENST00000513470 337 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms