Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPL7P52-201ENST00000449200 742 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC010655.1-201ENST00000449336 292 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 RPL12P26-201ENST00000452430 487 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC007991.1-201ENST00000522680 631 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 POLR2KP1-201ENST00000553226 168 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 MIR4474-201ENST00000579189 78 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL020997.2-201ENST00000602607 184 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AC006077.1-201ENST00000604746 343 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL365400.2-201ENST00000605604 902 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AL592295.2-201ENST00000612578 206 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 AP004607.9-201ENST00000618202 316 ntBASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLHC1Q8NHS4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 OR4A15-201ENST00000314706 1035 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 RPL32P23-201ENST00000397237 405 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 BTBD10P2-201ENST00000404779 676 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 PPIAP31-201ENST00000405422 495 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 ARPC3P2-201ENST00000457786 533 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 FTH1P2-201ENST00000466086 412 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 HMGB1P38-201ENST00000490557 577 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 FCF1P3-201ENST00000496394 590 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 PCNAP1-201ENST00000505363 709 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 MIR2116-201ENST00000517221 80 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 OR8R1P-201ENST00000543943 764 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 AC025260.1-201ENST00000548858 430 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 AL391597.1-201ENST00000618707 694 ntBASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.45□□□□□ -1.86
CLHC1Q8NHS4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC011978.2-201ENST00000569835 2054 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 MIR184-201ENST00000384962 84 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 FABP12P1-201ENST00000401911 322 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AL356967.1-201ENST00000406305 431 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RN7SKP156-201ENST00000410308 342 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 MTND4P22-201ENST00000413116 1169 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RNF19BPX-201ENST00000426224 625 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC006989.1-201ENST00000427212 131 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC104687.1-201ENST00000485829 412 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC010265.1-201ENST00000513509 211 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC016550.3-201ENST00000515706 767 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC007224.1-201ENST00000564410 144 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 MIR4286-201ENST00000580651 93 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 RNU1-30P-201ENST00000606575 163 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AL732618.1-201ENST00000623251 301 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 AC119674.1-207ENST00000641355 633 ntBASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLHC1Q8NHS4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms