Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC003001.2-201ENST00000616294 831 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AL162233.1-201ENST00000620014 944 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 AC068647.1-201ENST00000489539 2265 ntBASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC65Q8IXS2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AC092326.2-201ENST00000624772 1561 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AC096656.1-201ENST00000623826 1364 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AL136116.1-201ENST00000403591 381 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 RN7SKP53-201ENST00000411337 315 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 MTND4LP14-201ENST00000429447 288 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 CBX1P4-201ENST00000439415 457 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 TXNP1-201ENST00000441872 371 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 HMGN2P21-201ENST00000447764 270 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 RPL12P26-201ENST00000452430 487 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 RN7SL594P-201ENST00000470590 287 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AP006245.1-201ENST00000522549 120 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 CYP2C60P-201ENST00000566088 139 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AC006116.10-201ENST00000591836 581 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AC008121.2-201ENST00000614647 523 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 AP003072.4-201ENST00000624580 310 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 MIR7153-201ENST00000637758 57 ntBASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC65Q8IXS2 NMD3P1-201ENST00000439704 1488 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AL161912.2-201ENST00000565707 3007 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC009501.3-201ENST00000605001 1352 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 ZNF285B-201ENST00000561698 1767 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 SNORD51.1-201ENST00000365405 77 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AL359837.1-201ENST00000381357 287 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 RNU6-452P-201ENST00000384406 107 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC068533.1-201ENST00000418542 415 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 MTND4P24-201ENST00000424002 397 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 ZNF965P-201ENST00000432501 817 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 MED6P1-201ENST00000439659 713 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 RPL34P26-201ENST00000445636 354 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 RPS20P32-201ENST00000456044 356 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 SETP14-201ENST00000497538 873 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 RNU1-95P-201ENST00000516357 160 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 SNORA70.18-201ENST00000516696 98 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 RNU1-128P-201ENST00000516704 160 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC026333.2-201ENST00000542164 106 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC025260.1-201ENST00000548858 430 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AP003117.1-201ENST00000602771 554 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AP003117.2-201ENST00000606010 545 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC015726.3-201ENST00000624501 418 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC048347.1-201ENST00000624621 427 ntBASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC65Q8IXS2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 MFSD8-233ENST00000641482 4860 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 PWAR6-201ENST00000552334 4618 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 RNA5SP124-201ENST00000362739 110 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL353692.2-201ENST00000407054 335 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC127526.1-201ENST00000417526 366 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 RPL36AP36-201ENST00000418616 301 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 ZFAND6P1-201ENST00000434138 605 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms