Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 AC005618.1-201ENST00000606901 3148 ntBASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NPAS3Q8IXF0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 PARP4P1-201ENST00000435945 2337 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC105235.1-201ENST00000623208 1816 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC130360.2-201ENST00000533477 1556 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNU6-552P-201ENST00000362869 119 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNA5SP350-201ENST00000363298 111 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNA5SP478-201ENST00000364657 115 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNU6-1117P-201ENST00000384525 104 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNA5SP345-201ENST00000410646 108 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 Y_RNA.793-201ENST00000411222 111 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC078974.1-201ENST00000411597 223 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL590806.1-201ENST00000415818 853 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC092634.6-201ENST00000418558 192 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 ATG3P1-201ENST00000419507 911 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC245884.2-201ENST00000426257 404 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RPL7P28-201ENST00000437739 740 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC064862.4-201ENST00000442180 334 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RPS27AP15-201ENST00000447672 466 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL445466.1-201ENST00000448432 357 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC112492.4-201ENST00000456549 352 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 HSPE1P22-201ENST00000456856 327 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RPS29P15-201ENST00000458329 171 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RPL35AP28-201ENST00000459730 331 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC110749.1-201ENST00000462007 357 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 SUMO2P4-201ENST00000504193 276 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 HSPD1P15-201ENST00000505573 1122 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNU6-1278P-201ENST00000516130 107 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 RNU6-1016P-201ENST00000516689 94 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 HMGB1P23-201ENST00000518743 568 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC107934.1-201ENST00000522215 217 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC112191.2-201ENST00000522428 333 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 MIR4776-2-201ENST00000580204 80 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC027229.1-201ENST00000583887 253 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC097467.4-201ENST00000605504 141 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL138960.1-201ENST00000613838 513 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL355365.1-201ENST00000616480 294 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 MIR6826-201ENST00000617808 98 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC010378.1-201ENST00000619270 362 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC021753.1-201ENST00000635724 168 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC008013.2-202ENST00000637965 364 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AL596275.2-208ENST00000641192 594 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC013268.3-201ENST00000262716 2324 ntBASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.37□□□□□ -1.39
NPAS3Q8IXF0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 OR4G1P-202ENST00000641173 1788 ntBASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 AL359893.1-201ENST00000447628 1580 ntBASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS3Q8IXF0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms