Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RNU6-356P-201ENST00000384140 107 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RNU6-185P-201ENST00000384421 107 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RN7SKP285-201ENST00000410137 318 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 ELOCP11-201ENST00000436690 332 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AL031663.1-201ENST00000437445 219 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 ELOCP16-201ENST00000444494 332 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AL359073.1-201ENST00000448036 403 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 RPL7P48-201ENST00000461513 746 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 PTGES3P3-201ENST00000511479 482 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC016550.3-201ENST00000515706 767 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 MED28P5-201ENST00000528254 438 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AL357559.1-201ENST00000622228 274 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDKL3Q8IVW4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 MIR134-201ENST00000385258 73 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 RPL21P17-201ENST00000397467 475 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC025750.1-201ENST00000399891 379 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC008065.1-201ENST00000428525 348 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 NEK4P1-201ENST00000433383 879 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC073387.1-201ENST00000453261 709 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC074029.2-201ENST00000551045 634 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC010928.3-201ENST00000587712 541 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AL365503.1-201ENST00000605247 905 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC090525.3-201ENST00000605601 189 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC073111.2-201ENST00000605657 1075 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC245389.2-201ENST00000616023 576 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC242843.1-201ENST00000618702 573 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 AC015726.3-201ENST00000624501 418 ntBASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
CDKL3Q8IVW4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AL157700.1-201ENST00000561973 1432 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 MIR30E-201ENST00000362104 92 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 MIR421-201ENST00000365696 85 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 EI24P2-201ENST00000397776 1076 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 RPL23AP82-202ENST00000427528 469 ntBASIC3.56□□□□□ -1.84
CDKL3Q8IVW4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms