Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.05□□□□□ -1.6
SWSAP1Q6NVH7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SWSAP1Q6NVH7 ELL2P3-201ENST00000457883 1602 ntBASIC5.05□□□□□ -1.6
SWSAP1Q6NVH7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RNA5SP391-201ENST00000363456 119 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RNU1-130P-201ENST00000363930 160 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SNORD116-9-201ENST00000384000 95 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SNORD116-3-201ENST00000384287 95 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SNORD116-7-201ENST00000384404 95 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SNORD116-5-201ENST00000384462 95 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RNU6-441P-201ENST00000384545 106 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RNU4-25P-201ENST00000410569 230 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC004022.2-201ENST00000413824 193 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SEPT2P1-201ENST00000419651 180 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RAD23BP1-201ENST00000421404 1227 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC019178.2-201ENST00000423595 505 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC091390.1-201ENST00000433904 331 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 YWHAZP8-201ENST00000436935 731 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 TPT1P12-201ENST00000448968 492 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC012671.1-201ENST00000451912 203 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC092754.2-201ENST00000463506 460 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC112206.1-201ENST00000468416 477 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC087879.1-201ENST00000474343 374 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC023424.1-201ENST00000496058 459 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 MTATP6P22-201ENST00000507369 598 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC005178.1-201ENST00000508392 440 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC018797.3-201ENST00000513388 1241 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC239860.2-201ENST00000525886 270 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 MTCYBP28-201ENST00000566728 1132 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 VN1R90P-201ENST00000595717 726 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC015726.1-201ENST00000602353 681 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC091931.1-201ENST00000623488 728 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC011944.2-201ENST00000624440 683 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AP000843.1-201ENST00000624880 701 ntBASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SWSAP1Q6NVH7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RNA5SP509-201ENST00000364577 119 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AL023807.1-201ENST00000407932 359 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RN7SKP182-201ENST00000410772 298 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RPL23AP39-201ENST00000415533 405 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 NUP35P2-201ENST00000416748 943 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 COX6CP15-201ENST00000426313 211 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC098826.1-201ENST00000433943 471 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 ISCA1P2-201ENST00000438679 421 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 CBX1P1-201ENST00000440184 427 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 UBE2D3P4-201ENST00000441973 436 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC009961.3-201ENST00000449832 765 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 TRBV26-201ENST00000456572 344 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RN7SL385P-201ENST00000468873 276 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC092045.1-201ENST00000495716 1231 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC108043.1-201ENST00000512696 574 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC015795.1-201ENST00000513669 327 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RNU6-583P-201ENST00000516012 92 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC107982.3-201ENST00000584957 985 ntBASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.03□□□□□ -1.6
SWSAP1Q6NVH7 AC010738.1-201ENST00000604970 987 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms