Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDC42BPAQ5VT25 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 RNA5SP126-201ENST00000365092 109 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 RPS12P5-201ENST00000423449 371 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AC019097.1-201ENST00000424783 735 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 DUTP6-201ENST00000425573 462 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AC108938.1-201ENST00000451204 136 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 MTCO1P7-201ENST00000419523 1542 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AL645937.1-202ENST00000421799 937 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 COX6CP8-201ENST00000522620 226 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 OR5G4P-201ENST00000525251 760 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 Z82195.1-201ENST00000604558 398 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 OR2AS2P-201ENST00000606902 342 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 AC019080.5-201ENST00000624891 757 ntBASIC4.58□□□□□ -1.68
CDC42BPAQ5VT25 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 GABRG2-229ENST00000641017 3628 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 AL136360.1-201ENST00000503377 1900 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 AL031985.3-201ENST00000565390 2449 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 RN7SKP56-201ENST00000410513 331 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 FGF7P3-201ENST00000454645 303 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 AC079600.2-201ENST00000550076 130 ntBASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42BPAQ5VT25 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 MTCO1P8-201ENST00000416914 1523 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 HMGN2P7-201ENST00000456186 273 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AC090281.1-201ENST00000523019 276 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AP001636.2-201ENST00000525517 696 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AC141257.3-201ENST00000572906 215 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 AC004832.5-201ENST00000608677 401 ntBASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42BPAQ5VT25 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 RPS4XP8-201ENST00000402039 771 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AL139095.1-201ENST00000404326 391 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 RHEBP3-201ENST00000411920 351 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC025946.2-201ENST00000603398 234 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AL359693.1-201ENST00000614959 2407 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC126389.1-201ENST00000477436 290 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 RN7SL20P-201ENST00000488827 297 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 AC008507.1-201ENST00000587506 734 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 NRBF2P5-201ENST00000603087 788 ntBASIC4.55□□□□□ -1.68
CDC42BPAQ5VT25 RPS4XP5-202ENST00000449995 1334 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 RNU6-859P-201ENST00000362728 107 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 ARF4P3-201ENST00000397387 509 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 RNA5SP217-201ENST00000515959 91 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 AL359535.1-201ENST00000612100 1087 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 AC091903.1-201ENST00000624322 454 ntBASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42BPAQ5VT25 AC097634.1-201ENST00000604491 2467 ntBASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 U3.42-201ENST00000408746 214 ntBASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 RAC1P3-201ENST00000416129 580 ntBASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 NIPA2P5-201ENST00000452282 464 ntBASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 METTL15P1-201ENST00000481421 1045 ntBASIC4.53□□□□□ -1.68
CDC42BPAQ5VT25 AC011602.1-201ENST00000546484 331 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms