Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC006116.3-201ENST00000592968 361 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC243773.3-201ENST00000613270 256 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC241377.1-201ENST00000619797 406 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AL162373.1-201ENST00000620433 407 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC026634.1-201ENST00000634369 198 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC010149.2-201ENST00000637608 315 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 AC119674.1-212ENST00000641155 993 ntBASIC7.15□□□□□ -1.26
RC3H1Q5TC82 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
RC3H1Q5TC82 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 HSPA8P18-201ENST00000439846 1928 ntBASIC7.15□□□□□ -1.27
RC3H1Q5TC82 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 AC022819.1-201ENST00000563495 3910 ntBASIC7.15□□□□□ -1.27
RC3H1Q5TC82 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 AL117339.4-201ENST00000608335 7063 ntBASIC7.15□□□□□ -1.27
RC3H1Q5TC82 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.15□□□□□ -1.27
RC3H1Q5TC82 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.46-201ENST00000362695 102 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RNU6-1097P-201ENST00000363586 107 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AL121972.1-201ENST00000402023 252 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RNU4-26P-201ENST00000410270 107 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MCFD2P1-201ENST00000417812 300 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RGS17P1-201ENST00000423358 553 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC104837.2-201ENST00000427236 424 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC104651.2-201ENST00000447549 528 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RPS23P9-201ENST00000448848 438 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 ELOCP24-201ENST00000456370 334 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 TRBV1-201ENST00000476502 284 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RPSAP51-201ENST00000497462 645 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC091885.1-201ENST00000506658 268 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MTCYBP40-201ENST00000509390 1135 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 FAM206BP-201ENST00000510179 541 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RNU6-976P-201ENST00000516086 111 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RNU6-635P-201ENST00000516651 102 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 IGLV3-24-201ENST00000517477 197 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 OR4R1P-201ENST00000529879 463 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC093519.1-201ENST00000566109 298 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC062037.2-201ENST00000610137 73 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC032011.1-201ENST00000611703 1549 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AC078938.1-201ENST00000620993 318 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AP002799.1-201ENST00000623552 423 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 AP001784.1-201ENST00000624107 428 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MFSD8-239ENST00000641590 2479 ntBASIC7.14□□□□□ -1.27
RC3H1Q5TC82 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RC3H1Q5TC82 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 MTND5P19-201ENST00000424872 1794 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 NRK-204ENST00000540278 1687 ntTSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AP004289.2-201ENST00000444413 1457 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 RPL7P10-201ENST00000417407 739 ntBASIC7.13□□□□□ -1.27
RC3H1Q5TC82 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.13□□□□□ -1.27
RC3H1Q5TC82 PRUNEP1-201ENST00000425846 705 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms