Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPS29P4-201ENST00000414733 161 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AP000907.1-201ENST00000428428 510 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 HMGN2P31-201ENST00000432430 273 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AL035458.1-201ENST00000433096 585 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC105402.2-201ENST00000438503 358 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 HMGB1P5-202ENST00000451497 985 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 SNORA84-201ENST00000459229 133 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 RPL9P32-201ENST00000464118 620 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC110792.2-201ENST00000510278 224 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC010285.3-201ENST00000511668 676 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 SNORA26.10-201ENST00000516427 141 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC015802.5-201ENST00000607478 399 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC105429.2-201ENST00000610567 517 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC006133.1-201ENST00000617106 264 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 AC034229.5-201ENST00000624258 185 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 SNORA62.3-201ENST00000365110 153 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 MIR218-2-201ENST00000385006 110 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 RPS20P25-201ENST00000412447 352 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC127526.1-201ENST00000417526 366 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 TRIM60P13-201ENST00000432350 1283 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 PLGLA-201ENST00000465668 449 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 RPL21P103-201ENST00000479921 488 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 IGKV2-26-201ENST00000518305 343 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC007458.1-201ENST00000542812 373 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 TGIF1P1-201ENST00000558095 802 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AP000919.1-202ENST00000581139 1264 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 PCNAP1-202ENST00000595299 752 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 LLPHP1-201ENST00000603571 367 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC127502.3-201ENST00000636170 1206 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AC244258.1-201ENST00000637553 1071 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AL122126.1-201ENST00000546905 1318 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 AL356274.2-201ENST00000624379 3752 ntBASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PTPN20Q4JDL3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 RNU6-40P-201ENST00000384254 107 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 RN7SKP111-201ENST00000410349 271 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 RNU4-74P-201ENST00000411280 161 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC245052.5-201ENST00000416320 649 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 HMGN2P21-201ENST00000447764 270 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms