Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TPTE2P3-201ENST00000441562 1189 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 RPL7P61-201ENST00000451721 751 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 RPL5P24-201ENST00000463742 885 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 KLRA1P-201ENST00000503499 986 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AC010460.2-201ENST00000509054 677 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.86□□□□□ -1.79
SCN1BQ07699 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 MTATP6P9-201ENST00000515039 680 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 SNORA31.20-201ENST00000517111 133 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 RFPL1S-203ENST00000539579 330 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 OR7E18P-201ENST00000592589 702 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AL035411.2-201ENST00000604022 421 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AL160290.3-201ENST00000604869 165 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 AC018755.4-201ENST00000619715 454 ntBASIC3.86□□□□□ -1.79
SCN1BQ07699 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.86□□□□□ -1.79
SCN1BQ07699 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
SCN1BQ07699 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SCN1BQ07699 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN1BQ07699 ZNF137P-201ENST00000456718 1920 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 MTCO1P23-201ENST00000415223 1526 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 SDAD1P1-202ENST00000524156 2051 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN1BQ07699 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN1BQ07699 SNORA51.2-201ENST00000364595 132 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 MIR105-2-201ENST00000385083 81 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 MIR323B-201ENST00000385269 82 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 HSPE1P26-201ENST00000405341 275 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 SNORA3C-201ENST00000408792 125 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC104837.2-201ENST00000427236 424 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN1BQ07699 SDR42E1P3-201ENST00000438345 502 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AL162151.2-201ENST00000448875 158 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 RPS3AP53-201ENST00000454716 778 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 snoU109.3-201ENST00000459477 145 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC104164.3-201ENST00000467363 1258 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 IGLV2-34-201ENST00000490007 283 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC108941.1-201ENST00000502853 530 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 MTCYBP16-201ENST00000509187 1129 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AP001922.4-201ENST00000526967 290 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AP000676.2-201ENST00000529711 301 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AL139174.1-201ENST00000531489 886 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC109635.4-202ENST00000531666 412 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.85□□□□□ -1.79
SCN1BQ07699 PCNPP1-201ENST00000552501 511 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC016180.1-201ENST00000567945 403 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC141257.3-201ENST00000572906 215 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN1BQ07699 AL390838.2-201ENST00000602394 274 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 XIAPP1-201ENST00000603162 600 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC103881.1-201ENST00000603476 538 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC013244.1-201ENST00000604279 193 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC128687.1-201ENST00000605304 619 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC005332.6-201ENST00000613178 446 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 RN7SL722P-201ENST00000617780 284 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 RN7SL565P-201ENST00000618246 284 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AL121895.2-201ENST00000619558 447 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC018445.2-201ENST00000622987 260 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.85□□□□□ -1.79
SCN1BQ07699 CYP3A51P-201ENST00000633513 256 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AC139713.2-214ENST00000642059 1811 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 AC109315.1-201ENST00000584143 1347 ntBASIC3.85□□□□□ -1.79
SCN1BQ07699 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN1BQ07699 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms