Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 HMGB2P1-201ENST00000591146 634 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 AC115621.1-201ENST00000604653 858 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 AC106791.2-201ENST00000604680 391 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CX3CL1P78423 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 AL359893.1-201ENST00000447628 1580 ntBASIC3.7□□□□□ -1.82
CX3CL1P78423 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CX3CL1P78423 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.7□□□□□ -1.82
CX3CL1P78423 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CX3CL1P78423 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.7□□□□□ -1.82
CX3CL1P78423 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 AL590240.1-201ENST00000334118 313 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 RNA5SP87-201ENST00000384155 118 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 MTCYBP38-201ENST00000417160 1123 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 MTND2P18-201ENST00000419962 1030 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL360081.1-201ENST00000428299 555 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL356276.2-201ENST00000435919 558 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL591503.2-201ENST00000442314 1005 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 MTCO3P11-201ENST00000455103 774 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC026410.2-201ENST00000460281 156 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.69□□□□□ -1.82
CX3CL1P78423 RPL21P103-201ENST00000479921 488 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC108022.1-201ENST00000493466 478 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC026412.2-201ENST00000512270 1075 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC104986.1-201ENST00000517978 436 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 IGKV1-32-201ENST00000519290 311 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 OR8L1P-201ENST00000534005 955 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 OSBPL9P5-201ENST00000542581 171 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AL121834.1-201ENST00000572284 509 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.69□□□□□ -1.82
CX3CL1P78423 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC024940.4-201ENST00000605507 246 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC090116.1-201ENST00000615679 446 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AP001784.1-201ENST00000624107 428 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AC067931.1-201ENST00000624190 671 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 BMS1P21-201ENST00000634565 365 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 PABPC1P7-201ENST00000413177 1513 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 AP002907.1-201ENST00000606361 1430 ntBASIC3.69□□□□□ -1.82
CX3CL1P78423 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CX3CL1P78423 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CX3CL1P78423 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.69□□□□□ -1.82
CX3CL1P78423 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CX3CL1P78423 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CL1P78423 AC108467.2-201ENST00000617640 1597 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CX3CL1P78423 MTND4P26-201ENST00000415971 1359 ntBASIC3.68□□□□□ -1.82
CX3CL1P78423 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms