Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC145207.9-201ENST00000623802 325 ntBASIC2.73□□□□□ -1.97
LSM3P62310 LRRC77P-213ENST00000637727 880 ntBASIC2.73□□□□□ -1.97
LSM3P62310 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LSM3P62310 DCAF13P3-201ENST00000561147 1334 ntBASIC2.72□□□□□ -1.97
LSM3P62310 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM3P62310 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM3P62310 MIR181A2-201ENST00000384863 110 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AL034403.1-201ENST00000399414 885 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM3P62310 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM3P62310 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LSM3P62310 AC244033.1-201ENST00000426826 870 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 AL365440.1-201ENST00000436135 2167 ntBASIC2.72□□□□□ -1.97
LSM3P62310 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM3P62310 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AC073387.1-201ENST00000453261 709 ntBASIC2.72□□□□□ -1.97
LSM3P62310 PTGES3P5-201ENST00000455109 434 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM3P62310 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM3P62310 AC021678.1-201ENST00000505195 936 ntBASIC2.72□□□□□ -1.97
LSM3P62310 SNX5P1-201ENST00000505757 1041 ntBASIC2.72□□□□□ -1.97
LSM3P62310 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM3P62310 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.72□□□□□ -1.97
LSM3P62310 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.72□□□□□ -1.97
LSM3P62310 MTCO1P30-201ENST00000515244 580 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM3P62310 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM3P62310 HIGD1AP1-201ENST00000550979 275 ntBASIC2.72□□□□□ -1.97
LSM3P62310 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.72□□□□□ -1.97
LSM3P62310 AL157394.1-201ENST00000562983 1224 ntBASIC2.72□□□□□ -1.97
LSM3P62310 MIR5685-201ENST00000579080 79 ntBASIC2.72□□□□□ -1.97
LSM3P62310 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM3P62310 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 AC100793.4-201ENST00000613683 429 ntBASIC2.72□□□□□ -1.97
LSM3P62310 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
LSM3P62310 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
LSM3P62310 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LSM3P62310 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 AL357075.1-201ENST00000404107 726 ntBASIC2.71□□□□□ -1.98
LSM3P62310 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 AL031121.1-201ENST00000406553 254 ntBASIC2.71□□□□□ -1.98
LSM3P62310 BX323014.1-201ENST00000412876 237 ntBASIC2.71□□□□□ -1.98
LSM3P62310 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LSM3P62310 RPS15AP29-201ENST00000445539 400 ntBASIC2.71□□□□□ -1.98
LSM3P62310 HMGN2P21-201ENST00000447764 270 ntBASIC2.71□□□□□ -1.98
LSM3P62310 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM3P62310 TPT1P12-201ENST00000448968 492 ntBASIC2.71□□□□□ -1.98
LSM3P62310 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 RN7SL610P-201ENST00000463845 291 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 AC023050.1-201ENST00000498198 304 ntBASIC2.71□□□□□ -1.98
LSM3P62310 DYNLL1P6-201ENST00000503440 264 ntBASIC2.71□□□□□ -1.98
LSM3P62310 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.71□□□□□ -1.98
LSM3P62310 RN7SKP13-201ENST00000515933 244 ntBASIC2.71□□□□□ -1.98
LSM3P62310 RN7SKP18-201ENST00000516005 275 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC034205.1-201ENST00000520621 638 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM3P62310 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 ELOCP31-201ENST00000540463 467 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC087888.1-201ENST00000550884 1254 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM3P62310 OR4T1P-201ENST00000554933 911 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM3P62310 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 HSPE1P5-201ENST00000561489 272 ntBASIC2.71□□□□□ -1.98
LSM3P62310 MTCO3P13-201ENST00000577757 781 ntBASIC2.71□□□□□ -1.98
LSM3P62310 MIR4276-201ENST00000584832 70 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM3P62310 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM3P62310 AC011468.4-201ENST00000603942 409 ntBASIC2.71□□□□□ -1.98
LSM3P62310 PRELID3BP8-201ENST00000604148 295 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AP003117.2-201ENST00000606010 545 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AL592494.3-201ENST00000609485 464 ntBASIC2.71□□□□□ -1.98
LSM3P62310 MIR6716-201ENST00000613413 80 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AP003400.2-201ENST00000624036 666 ntBASIC2.71□□□□□ -1.98
LSM3P62310 AC004943.3-201ENST00000624116 600 ntBASIC2.71□□□□□ -1.98
LSM3P62310 MIR4278-201ENST00000636094 69 ntBASIC2.71□□□□□ -1.98
LSM3P62310 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM3P62310 AL355578.1-201ENST00000607405 1328 ntBASIC2.7□□□□□ -1.98
LSM3P62310 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LSM3P62310 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LSM3P62310 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LSM3P62310 RN7SKP280-201ENST00000364196 304 ntBASIC2.7□□□□□ -1.98
LSM3P62310 RNA5SP167-201ENST00000365461 116 ntBASIC2.7□□□□□ -1.98
LSM3P62310 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.7□□□□□ -1.98
LSM3P62310 SNORA26.7-201ENST00000391288 122 ntBASIC2.7□□□□□ -1.98
LSM3P62310 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.7□□□□□ -1.98
LSM3P62310 MIR887-201ENST00000401258 79 ntBASIC2.7□□□□□ -1.98
LSM3P62310 RNU6-628P-201ENST00000410675 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms