Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU2-6P-201ENST00000411404 190 ntBASIC3.53□□□□□ -1.84
LMO4P61968 VDAC1P9-201ENST00000412766 841 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.53□□□□□ -1.84
LMO4P61968 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.53□□□□□ -1.84
LMO4P61968 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 AC092170.1-201ENST00000440211 356 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.53□□□□□ -1.84
LMO4P61968 TAF9P1-201ENST00000445421 515 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AL050341.1-201ENST00000447743 313 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC097262.1-201ENST00000452559 548 ntBASIC3.53□□□□□ -1.84
LMO4P61968 TAF9P2-201ENST00000454958 515 ntBASIC3.53□□□□□ -1.84
LMO4P61968 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 BZW1P2-201ENST00000473537 826 ntBASIC3.53□□□□□ -1.84
LMO4P61968 RPL23AP65-201ENST00000475608 468 ntBASIC3.53□□□□□ -1.84
LMO4P61968 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 RPL30P11-201ENST00000495304 339 ntBASIC3.53□□□□□ -1.84
LMO4P61968 OR5H4P-201ENST00000510851 923 ntBASIC3.53□□□□□ -1.84
LMO4P61968 MTND3P5-201ENST00000512798 333 ntBASIC3.53□□□□□ -1.84
LMO4P61968 MTCO2P32-201ENST00000514865 403 ntBASIC3.53□□□□□ -1.84
LMO4P61968 RN7SKP46-201ENST00000515942 234 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.53□□□□□ -1.84
LMO4P61968 AC105233.3-201ENST00000531125 744 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.53□□□□□ -1.84
LMO4P61968 PDCD5P1-201ENST00000543528 309 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC007115.1-201ENST00000546853 234 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC087465.1-201ENST00000560574 245 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC106785.1-201ENST00000565935 262 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC002400.1-201ENST00000569310 726 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 HNRNPCP4-201ENST00000571636 900 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC093227.2-201ENST00000589357 285 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 EIF1P6-201ENST00000600054 334 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AP000811.1-201ENST00000603803 651 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.53□□□□□ -1.84
LMO4P61968 AC097505.1-201ENST00000610199 565 ntBASIC3.53□□□□□ -1.84
LMO4P61968 AC107075.1-201ENST00000613695 314 ntBASIC3.53□□□□□ -1.84
LMO4P61968 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LMO4P61968 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 AC046144.1-201ENST00000478559 1853 ntBASIC3.53□□□□□ -1.84
LMO4P61968 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 CASC19-204ENST00000641001 2055 ntBASIC3.53□□□□□ -1.84
LMO4P61968 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC007529.1-201ENST00000418574 2178 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 SGO1P2-201ENST00000429458 1589 ntBASIC3.52□□□□□ -1.85
LMO4P61968 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LMO4P61968 NACA3P-201ENST00000359690 648 ntBASIC3.52□□□□□ -1.85
LMO4P61968 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
LMO4P61968 RN7SKP280-201ENST00000364196 304 ntBASIC3.52□□□□□ -1.85
LMO4P61968 RNU1-64P-201ENST00000365443 163 ntBASIC3.52□□□□□ -1.85
LMO4P61968 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 RNU6-157P-201ENST00000383957 107 ntBASIC3.52□□□□□ -1.85
LMO4P61968 RNU2-65P-201ENST00000410162 185 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 OR8G2P-201ENST00000412796 908 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 OR4K6P-201ENST00000416478 897 ntBASIC3.52□□□□□ -1.85
LMO4P61968 TAF13P2-201ENST00000416876 286 ntBASIC3.52□□□□□ -1.85
LMO4P61968 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AC019178.2-201ENST00000423595 505 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC098826.1-201ENST00000433943 471 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC122718.1-201ENST00000439448 744 ntBASIC3.52□□□□□ -1.85
LMO4P61968 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 CDC27P1-201ENST00000445384 715 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.52□□□□□ -1.85
LMO4P61968 AC009961.3-201ENST00000449832 765 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 RPL5P32-201ENST00000454085 879 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AL591473.1-201ENST00000464297 313 ntBASIC3.52□□□□□ -1.85
LMO4P61968 FAM133DP-201ENST00000464802 691 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC090013.1-201ENST00000485147 480 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms