Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COX6CP15-201ENST00000426313 211 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 SETD6P1-201ENST00000444575 317 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 RPS3AP50-201ENST00000487064 803 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 RPL23AP73-201ENST00000492507 471 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 CDH12P2-201ENST00000504393 298 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 SNORA31.9-201ENST00000516429 84 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC087369.1-201ENST00000520775 996 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AC022695.1-201ENST00000522089 237 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC109635.4-202ENST00000531666 412 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC125611.2-201ENST00000551907 647 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AC068831.4-201ENST00000556118 109 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC091057.2-201ENST00000602594 792 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 AL590282.1-201ENST00000610379 1136 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS1BP61024 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CKS1BP61024 AC006249.1-201ENST00000621223 471 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 AC090897.3-201ENST00000636973 1157 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS1BP61024 AC092447.7-201ENST00000422212 1621 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS1BP61024 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CKS1BP61024 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CKS1BP61024 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 METTL21EP-201ENST00000298105 713 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 SNORD56.3-201ENST00000363507 71 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.51□□□□□ -2.01
CKS1BP61024 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CKS1BP61024 MIR1289-1-201ENST00000408836 144 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 RAP1BP1-201ENST00000412709 553 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 AL390023.1-201ENST00000428836 262 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 SAR1AP4-201ENST00000429225 591 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 MOB1AP1-201ENST00000430903 535 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 ELOCP13-201ENST00000443934 329 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 BX276092.4-201ENST00000452056 248 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS1BP61024 AL445669.2-201ENST00000454425 421 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.51□□□□□ -2.01
CKS1BP61024 RPS23P7-201ENST00000466210 444 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 MTND3P6-201ENST00000485242 339 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 AC111000.2-201ENST00000507775 550 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS1BP61024 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS1BP61024 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.51□□□□□ -2.01
CKS1BP61024 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.51□□□□□ -2.01
CKS1BP61024 VIS1.1-201ENST00000610517 203 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 AP003122.6-201ENST00000623831 495 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS1BP61024 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.51□□□□□ -2.01
CKS1BP61024 AF001550.2-201ENST00000636643 217 ntBASIC2.51□□□□□ -2.01
CKS1BP61024 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.51□□□□□ -2.01
CKS1BP61024 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.51□□□□□ -2.01
CKS1BP61024 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKS1BP61024 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 RNU6-50P-201ENST00000362356 103 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 SNORA14A-201ENST00000364773 135 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 SNORA62-201ENST00000365493 153 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 RNU1-109P-201ENST00000383960 147 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 MIR323B-201ENST00000385269 82 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 RPS27AP11-201ENST00000402798 447 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.5□□□□□ -2.01
CKS1BP61024 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.5□□□□□ -2.01
CKS1BP61024 AC007394.1-201ENST00000421941 531 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 RPS6P14-201ENST00000425165 719 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.5□□□□□ -2.01
CKS1BP61024 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CKS1BP61024 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.5□□□□□ -2.01
CKS1BP61024 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.5□□□□□ -2.01
CKS1BP61024 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.5□□□□□ -2.01
CKS1BP61024 AC010655.1-201ENST00000449336 292 ntBASIC2.5□□□□□ -2.01
CKS1BP61024 RPL5P13-201ENST00000462840 709 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms