Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
ACTBP60709 TRBV8-2-201ENST00000475637 270 ntBASIC3.13□□□□□ -1.91
ACTBP60709 MTCO3P35-201ENST00000485582 781 ntBASIC3.13□□□□□ -1.91
ACTBP60709 RPS4XP15-201ENST00000489210 795 ntBASIC3.13□□□□□ -1.91
ACTBP60709 RPL23AP55-201ENST00000498163 452 ntBASIC3.13□□□□□ -1.91
ACTBP60709 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.13□□□□□ -1.91
ACTBP60709 FTH1P21-201ENST00000512179 511 ntBASIC3.13□□□□□ -1.91
ACTBP60709 MTCO2P32-201ENST00000514865 403 ntBASIC3.13□□□□□ -1.91
ACTBP60709 FABP5P12-201ENST00000515543 389 ntBASIC3.13□□□□□ -1.91
ACTBP60709 RNU2-27P-201ENST00000516185 142 ntBASIC3.13□□□□□ -1.91
ACTBP60709 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
ACTBP60709 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTBP60709 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTBP60709 MTCYBP41-201ENST00000528913 1123 ntBASIC3.13□□□□□ -1.91
ACTBP60709 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTBP60709 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTBP60709 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.13□□□□□ -1.91
ACTBP60709 AL606490.9-201ENST00000603331 271 ntBASIC3.13□□□□□ -1.91
ACTBP60709 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.13□□□□□ -1.91
ACTBP60709 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
ACTBP60709 HSPA8P19-201ENST00000505359 1517 ntBASIC3.13□□□□□ -1.91
ACTBP60709 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.12□□□□□ -1.91
ACTBP60709 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.12□□□□□ -1.91
ACTBP60709 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 AC117529.2-201ENST00000512159 2068 ntBASIC3.12□□□□□ -1.91
ACTBP60709 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ACTBP60709 MIR372-201ENST00000362225 67 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
ACTBP60709 SAR1AP2-201ENST00000392696 594 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.12□□□□□ -1.91
ACTBP60709 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 AC007563.3-201ENST00000433233 371 ntBASIC3.12□□□□□ -1.91
ACTBP60709 GOT2P5-201ENST00000433995 546 ntBASIC3.12□□□□□ -1.91
ACTBP60709 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
ACTBP60709 Z99127.2-201ENST00000441426 334 ntBASIC3.12□□□□□ -1.91
ACTBP60709 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
ACTBP60709 BX276092.4-201ENST00000452056 248 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AC103987.1-201ENST00000473394 348 ntBASIC3.12□□□□□ -1.91
ACTBP60709 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.12□□□□□ -1.91
ACTBP60709 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AC110768.1-201ENST00000509222 400 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AF279873.1-201ENST00000523393 313 ntBASIC3.12□□□□□ -1.91
ACTBP60709 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.12□□□□□ -1.91
ACTBP60709 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ACTBP60709 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.12□□□□□ -1.91
ACTBP60709 AL049870.4-201ENST00000555741 486 ntBASIC3.12□□□□□ -1.91
ACTBP60709 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
ACTBP60709 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.12□□□□□ -1.91
ACTBP60709 AC007224.1-201ENST00000564410 144 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.12□□□□□ -1.91
ACTBP60709 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 AC245128.3-201ENST00000594721 748 ntBASIC3.12□□□□□ -1.91
ACTBP60709 HMGB1P51-201ENST00000605166 638 ntBASIC3.12□□□□□ -1.91
ACTBP60709 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.12□□□□□ -1.91
ACTBP60709 AC079684.1-201ENST00000621405 437 ntBASIC3.12□□□□□ -1.91
ACTBP60709 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.12□□□□□ -1.91
ACTBP60709 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ACTBP60709 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
ACTBP60709 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.12□□□□□ -1.91
ACTBP60709 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ACTBP60709 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.11□□□□□ -1.91
ACTBP60709 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ACTBP60709 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 OR4A15-201ENST00000314706 1035 ntBASIC3.11□□□□□ -1.91
ACTBP60709 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ACTBP60709 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.11□□□□□ -1.91
ACTBP60709 MIR1250-201ENST00000408098 113 ntBASIC3.11□□□□□ -1.91
ACTBP60709 RN7SKP263-201ENST00000411194 309 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.11□□□□□ -1.91
ACTBP60709 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
ACTBP60709 OR8F1P-201ENST00000425243 930 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC004975.1-201ENST00000428733 208 ntBASIC3.11□□□□□ -1.91
ACTBP60709 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC074367.1-201ENST00000438685 1125 ntBASIC3.11□□□□□ -1.91
ACTBP60709 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.11□□□□□ -1.91
ACTBP60709 HSPE1P28-201ENST00000443139 211 ntBASIC3.11□□□□□ -1.91
ACTBP60709 RPL21P89-201ENST00000444021 467 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC010655.1-201ENST00000449336 292 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.11□□□□□ -1.91
ACTBP60709 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
ACTBP60709 AC007688.1-201ENST00000475592 759 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms