Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 AL592437.2-201ENST00000421655 2434 ntBASIC4.01□□□□□ -1.77
PEX3P56589 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 HSPA8P1-201ENST00000425843 1833 ntBASIC4.01□□□□□ -1.77
PEX3P56589 MIR142-201ENST00000384835 87 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AC093719.1-202ENST00000392735 373 ntBASIC4.01□□□□□ -1.77
PEX3P56589 HMGB3P18-201ENST00000406327 590 ntBASIC4.01□□□□□ -1.77
PEX3P56589 ATP5A1P2-201ENST00000412323 255 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.01□□□□□ -1.77
PEX3P56589 RPL21P109-201ENST00000422213 475 ntBASIC4.01□□□□□ -1.77
PEX3P56589 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AC013262.1-201ENST00000426710 252 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 GTF2IP12-201ENST00000456547 356 ntBASIC4.01□□□□□ -1.77
PEX3P56589 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 RN7SKP18-201ENST00000516005 275 ntBASIC4.01□□□□□ -1.77
PEX3P56589 RN7SKP83-201ENST00000516512 178 ntBASIC4.01□□□□□ -1.77
PEX3P56589 RNA5SP143-201ENST00000516936 115 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AC104115.2-201ENST00000523026 687 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.01□□□□□ -1.77
PEX3P56589 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.01□□□□□ -1.77
PEX3P56589 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 AC025260.1-201ENST00000548858 430 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.01□□□□□ -1.77
PEX3P56589 AC126365.2-201ENST00000580630 379 ntBASIC4.01□□□□□ -1.77
PEX3P56589 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.01□□□□□ -1.77
PEX3P56589 AC068620.3-201ENST00000602749 560 ntBASIC4.01□□□□□ -1.77
PEX3P56589 AC078880.5-201ENST00000617845 421 ntBASIC4.01□□□□□ -1.77
PEX3P56589 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PEX3P56589 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 U6.107-201ENST00000637108 79 ntBASIC4.01□□□□□ -1.77
PEX3P56589 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 LINC00561-201ENST00000565815 2738 ntBASIC4.01□□□□□ -1.77
PEX3P56589 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PEX3P56589 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PEX3P56589 MTND4P9-201ENST00000507819 1346 ntBASIC4□□□□□ -1.77
PEX3P56589 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
PEX3P56589 RNF6P1-201ENST00000444889 1784 ntBASIC4□□□□□ -1.77
PEX3P56589 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4□□□□□ -1.77
PEX3P56589 SNORD9-201ENST00000362566 104 ntBASIC4□□□□□ -1.77
PEX3P56589 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
PEX3P56589 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 AC069282.1-201ENST00000411911 526 ntBASIC4□□□□□ -1.77
PEX3P56589 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4□□□□□ -1.77
PEX3P56589 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4□□□□□ -1.77
PEX3P56589 AC093422.3-201ENST00000428506 305 ntBASIC4□□□□□ -1.77
PEX3P56589 GCA-203ENST00000429691 824 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4□□□□□ -1.77
PEX3P56589 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4□□□□□ -1.77
PEX3P56589 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4□□□□□ -1.77
PEX3P56589 RPL6P5-201ENST00000445678 828 ntBASIC4□□□□□ -1.77
PEX3P56589 GXYLT1P1-201ENST00000446657 490 ntBASIC4□□□□□ -1.77
PEX3P56589 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 RPL7P15-201ENST00000461190 712 ntBASIC4□□□□□ -1.77
PEX3P56589 AC093801.2-201ENST00000503966 1050 ntBASIC4□□□□□ -1.77
PEX3P56589 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 AC005798.1-201ENST00000513715 387 ntBASIC4□□□□□ -1.77
PEX3P56589 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 AP003717.3-201ENST00000544832 1180 ntBASIC4□□□□□ -1.77
PEX3P56589 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 AC090666.1-201ENST00000578241 445 ntBASIC4□□□□□ -1.77
PEX3P56589 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 VN1R79P-201ENST00000593540 513 ntBASIC4□□□□□ -1.77
PEX3P56589 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4□□□□□ -1.77
PEX3P56589 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 AC110741.2-201ENST00000605278 268 ntBASIC4□□□□□ -1.77
PEX3P56589 AF129408.1-201ENST00000608767 431 ntBASIC4□□□□□ -1.77
PEX3P56589 AL732618.1-201ENST00000623251 301 ntBASIC4□□□□□ -1.77
PEX3P56589 AP006248.2-201ENST00000623309 592 ntBASIC4□□□□□ -1.77
PEX3P56589 MAPK10-372ENST00000641954 3413 ntBASIC4□□□□□ -1.77
PEX3P56589 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4□□□□□ -1.77
PEX3P56589 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4□□□□□ -1.77
PEX3P56589 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PEX3P56589 AC090337.1-201ENST00000579651 2074 ntBASIC3.99□□□□□ -1.77
PEX3P56589 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PEX3P56589 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.99□□□□□ -1.77
PEX3P56589 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.99□□□□□ -1.77
PEX3P56589 RNU6-304P-201ENST00000364855 107 ntBASIC3.99□□□□□ -1.77
PEX3P56589 MIR200C-201ENST00000384980 68 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AP002784.2-201ENST00000397300 549 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms