Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 MAPK10-263ENST00000641052 4307 ntBASIC4.18□□□□□ -1.74
CDH12P55289 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH12P55289 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH12P55289 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH12P55289 OR4A15-201ENST00000314706 1035 ntBASIC4.18□□□□□ -1.74
CDH12P55289 SNRPEP3-201ENST00000338402 276 ntBASIC4.18□□□□□ -1.74
CDH12P55289 RNU6-623P-201ENST00000363143 105 ntBASIC4.18□□□□□ -1.74
CDH12P55289 RNU6-374P-201ENST00000364146 108 ntBASIC4.18□□□□□ -1.74
CDH12P55289 Y_RNA.302-201ENST00000364997 102 ntBASIC4.18□□□□□ -1.74
CDH12P55289 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 AL138880.1-201ENST00000405824 642 ntBASIC4.18□□□□□ -1.74
CDH12P55289 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 VN1R8P-201ENST00000407739 893 ntBASIC4.18□□□□□ -1.74
CDH12P55289 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.18□□□□□ -1.74
CDH12P55289 MTCYBP38-201ENST00000417160 1123 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AL031736.2-201ENST00000426573 787 ntBASIC4.18□□□□□ -1.74
CDH12P55289 RPS26P47-201ENST00000427219 348 ntBASIC4.18□□□□□ -1.74
CDH12P55289 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.18□□□□□ -1.74
CDH12P55289 DLGAP5P1-201ENST00000430307 464 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.18□□□□□ -1.74
CDH12P55289 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 MTND6P18-201ENST00000439477 513 ntBASIC4.18□□□□□ -1.74
CDH12P55289 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 TRGVB-201ENST00000453257 471 ntBASIC4.18□□□□□ -1.74
CDH12P55289 KATNBL1P6-201ENST00000453433 915 ntBASIC4.18□□□□□ -1.74
CDH12P55289 ARPC3P2-201ENST00000457786 533 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC109486.1-201ENST00000486833 374 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC068724.1-201ENST00000487100 792 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 AC060788.1-201ENST00000521318 469 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC107918.3-201ENST00000533272 382 ntBASIC4.18□□□□□ -1.74
CDH12P55289 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH12P55289 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 AL389895.1-201ENST00000554127 252 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 AC018552.3-201ENST00000567416 561 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH12P55289 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH12P55289 RPL26P30-202ENST00000602923 645 ntBASIC4.18□□□□□ -1.74
CDH12P55289 HSPE1P14-201ENST00000605812 302 ntBASIC4.18□□□□□ -1.74
CDH12P55289 RN7SKP299-201ENST00000606679 301 ntBASIC4.18□□□□□ -1.74
CDH12P55289 AC090510.2-201ENST00000617465 629 ntBASIC4.18□□□□□ -1.74
CDH12P55289 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.18□□□□□ -1.74
CDH12P55289 U3.53-201ENST00000628922 216 ntBASIC4.18□□□□□ -1.74
CDH12P55289 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH12P55289 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH12P55289 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH12P55289 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH12P55289 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDH12P55289 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH12P55289 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH12P55289 RNU4-21P-201ENST00000362802 126 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNA5SP391-201ENST00000363456 119 ntBASIC4.17□□□□□ -1.74
CDH12P55289 Y_RNA.194-201ENST00000363985 102 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNU6-660P-201ENST00000364566 109 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNU6-1293P-201ENST00000384077 107 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNU6-921P-201ENST00000384361 107 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNU6-1122P-201ENST00000384449 107 ntBASIC4.17□□□□□ -1.74
CDH12P55289 DSTNP4-201ENST00000399472 474 ntBASIC4.17□□□□□ -1.74
CDH12P55289 AL645733.1-201ENST00000402250 217 ntBASIC4.17□□□□□ -1.74
CDH12P55289 NCSTNP1-201ENST00000406229 144 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RNU2-28P-201ENST00000410457 189 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RPS15AP38-201ENST00000413110 372 ntBASIC4.17□□□□□ -1.74
CDH12P55289 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH12P55289 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH12P55289 ATG4AP1-201ENST00000416893 538 ntBASIC4.17□□□□□ -1.74
CDH12P55289 AC009302.1-201ENST00000417147 390 ntBASIC4.17□□□□□ -1.74
CDH12P55289 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH12P55289 Z99497.1-201ENST00000421282 135 ntBASIC4.17□□□□□ -1.74
CDH12P55289 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH12P55289 AC073335.1-201ENST00000427776 363 ntBASIC4.17□□□□□ -1.74
CDH12P55289 VDAC1P6-201ENST00000430062 855 ntBASIC4.17□□□□□ -1.74
CDH12P55289 RPL36P19-201ENST00000430744 301 ntBASIC4.17□□□□□ -1.74
CDH12P55289 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.17□□□□□ -1.74
CDH12P55289 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH12P55289 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH12P55289 PTMAP6-201ENST00000439110 327 ntBASIC4.17□□□□□ -1.74
CDH12P55289 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms