Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.77□□□□□ -1.81
NUP98P52948 AL122125.1-201ENST00000616999 600 ntBASIC3.77□□□□□ -1.81
NUP98P52948 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
NUP98P52948 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NUP98P52948 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.76□□□□□ -1.81
NUP98P52948 SNORA79B-201ENST00000410557 148 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP98P52948 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP98P52948 AC019097.1-201ENST00000424783 735 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP98P52948 HMGN1P18-201ENST00000457642 277 ntBASIC3.76□□□□□ -1.81
NUP98P52948 KC877373.1-201ENST00000479066 408 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP98P52948 HIGD1AP13-201ENST00000509878 289 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.76□□□□□ -1.81
NUP98P52948 OR5G4P-201ENST00000525251 760 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AC011602.1-201ENST00000546484 331 ntBASIC3.76□□□□□ -1.81
NUP98P52948 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP98P52948 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.76□□□□□ -1.81
NUP98P52948 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP98P52948 AC007619.2-201ENST00000605743 379 ntBASIC3.76□□□□□ -1.81
NUP98P52948 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP98P52948 AC091903.1-201ENST00000624322 454 ntBASIC3.76□□□□□ -1.81
NUP98P52948 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP98P52948 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
NUP98P52948 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP98P52948 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP98P52948 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP98P52948 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.75□□□□□ -1.81
NUP98P52948 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP98P52948 AC087276.1-201ENST00000529659 480 ntBASIC3.75□□□□□ -1.81
NUP98P52948 AP005205.1-201ENST00000563503 508 ntBASIC3.75□□□□□ -1.81
NUP98P52948 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP98P52948 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP98P52948 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NUP98P52948 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP98P52948 SNORA48.8-201ENST00000391324 134 ntBASIC3.74□□□□□ -1.81
NUP98P52948 RHEBP3-201ENST00000411920 351 ntBASIC3.74□□□□□ -1.81
NUP98P52948 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP98P52948 AL109933.2-201ENST00000452651 260 ntBASIC3.74□□□□□ -1.81
NUP98P52948 RN7SL20P-201ENST00000488827 297 ntBASIC3.74□□□□□ -1.81
NUP98P52948 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 RMST_9.1-201ENST00000619945 193 ntBASIC3.74□□□□□ -1.81
NUP98P52948 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NUP98P52948 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP98P52948 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP98P52948 AC093909.5-201ENST00000621839 1799 ntBASIC3.74□□□□□ -1.81
NUP98P52948 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
NUP98P52948 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP98P52948 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 RPL7P26-201ENST00000333817 754 ntBASIC3.74□□□□□ -1.81
NUP98P52948 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP98P52948 AC002524.1-201ENST00000411687 547 ntBASIC3.74□□□□□ -1.81
NUP98P52948 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.74□□□□□ -1.81
NUP98P52948 AL358913.1-201ENST00000554342 121 ntBASIC3.74□□□□□ -1.81
NUP98P52948 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP98P52948 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP98P52948 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP98P52948 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP98P52948 LAP3P1-201ENST00000403648 294 ntBASIC3.73□□□□□ -1.81
NUP98P52948 RPL5P18-201ENST00000406671 891 ntBASIC3.73□□□□□ -1.81
NUP98P52948 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
NUP98P52948 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP98P52948 AC108078.3-201ENST00000502633 489 ntBASIC3.73□□□□□ -1.81
NUP98P52948 HIGD1AP3-201ENST00000515857 278 ntBASIC3.73□□□□□ -1.81
NUP98P52948 AC027309.2-201ENST00000520566 192 ntBASIC3.73□□□□□ -1.81
NUP98P52948 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP98P52948 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP98P52948 AC007998.5-201ENST00000622938 237 ntBASIC3.73□□□□□ -1.81
NUP98P52948 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP98P52948 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.73□□□□□ -1.81
NUP98P52948 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
NUP98P52948 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP98P52948 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP98P52948 ELL2P4-201ENST00000446870 1376 ntBASIC3.72□□□□□ -1.81
NUP98P52948 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP98P52948 U3.12-201ENST00000364498 214 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC110754.1-201ENST00000399740 601 ntBASIC3.72□□□□□ -1.81
NUP98P52948 RPL32P35-201ENST00000415214 394 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC234781.4-201ENST00000419384 244 ntBASIC3.72□□□□□ -1.81
NUP98P52948 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.72□□□□□ -1.81
NUP98P52948 RPS17P11-201ENST00000474297 293 ntBASIC3.72□□□□□ -1.81
NUP98P52948 LDHBP3-201ENST00000514909 822 ntBASIC3.72□□□□□ -1.81
NUP98P52948 OR10D4P-201ENST00000525892 951 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.72□□□□□ -1.81
NUP98P52948 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.72□□□□□ -1.81
NUP98P52948 CYCSP39-201ENST00000565821 309 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.72□□□□□ -1.81
NUP98P52948 MIR4513-201ENST00000581077 86 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC022509.4-201ENST00000621404 572 ntBASIC3.72□□□□□ -1.81
NUP98P52948 AC006840.1-201ENST00000623069 542 ntBASIC3.72□□□□□ -1.81
NUP98P52948 MTND5P24-201ENST00000438892 1767 ntBASIC3.72□□□□□ -1.81
NUP98P52948 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NUP98P52948 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.72□□□□□ -1.81
NUP98P52948 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NUP98P52948 RPS4XP5-202ENST00000449995 1334 ntBASIC3.72□□□□□ -1.81
NUP98P52948 XGY1-201ENST00000381172 446 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms