Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TNPO1P3-201ENST00000436471 2662 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 RNA5SP515-201ENST00000364570 118 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 RNU6-1293P-201ENST00000384077 107 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 MIR1193-201ENST00000408109 78 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 EIF2S2P3-201ENST00000428356 999 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 OR4F13P-201ENST00000428478 931 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 ARF4P2-201ENST00000430209 526 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 CKS1BP5-201ENST00000434172 273 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AL590399.6-201ENST00000446396 307 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 NANOGP10-201ENST00000453325 895 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC021146.1-201ENST00000511202 716 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 SETP12-201ENST00000514068 805 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC008494.2-201ENST00000514544 370 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 CIR1P1-201ENST00000524055 1133 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 MTND2P26-201ENST00000528255 1029 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 TRAV15-201ENST00000556680 249 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC025918.2-201ENST00000558683 763 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC107982.3-201ENST00000584957 985 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 Z82195.1-201ENST00000604558 398 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 RNU6-156P-201ENST00000621869 107 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 ASNSP1-204ENST00000641977 1664 ntBASIC3.29□□□□□ -1.88
CSNK1A1P48729 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSNK1A1P48729 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CSNK1A1P48729 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 SNORA7.2-201ENST00000364446 145 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 OR52E6-202ENST00000379946 954 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 MIR142-201ENST00000384835 87 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 MIR607-201ENST00000385241 96 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 SNORA57.1-201ENST00000391227 145 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 RNU2-17P-201ENST00000410290 190 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC009237.5-201ENST00000414271 501 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC127526.1-201ENST00000417526 366 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 RPL21P109-201ENST00000422213 475 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 Z77249.1-201ENST00000444622 1175 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 RPL23AP23-201ENST00000452590 471 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AL133162.1-201ENST00000463228 453 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC126121.1-201ENST00000482313 553 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 RN7SKP283-201ENST00000517197 270 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC008011.1-201ENST00000545989 227 ntBASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.28□□□□□ -1.88
CSNK1A1P48729 AC084824.1-201ENST00000550917 1005 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms