Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SNORA51.12-201ENST00000384448 134 ntBASIC4.73□□□□□ -1.65
CIITAP33076 RPS26P8-201ENST00000393490 348 ntBASIC4.73□□□□□ -1.65
CIITAP33076 RNU2-65P-201ENST00000410162 185 ntBASIC4.73□□□□□ -1.65
CIITAP33076 RNU6-77P-201ENST00000410554 91 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 RPS23P10-201ENST00000416185 486 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 AC016907.1-201ENST00000419483 435 ntBASIC4.73□□□□□ -1.65
CIITAP33076 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 GTF2IP7-202ENST00000436677 309 ntBASIC4.73□□□□□ -1.65
CIITAP33076 GEMIN8P3-201ENST00000445417 720 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC104978.1-201ENST00000449387 391 ntBASIC4.73□□□□□ -1.65
CIITAP33076 NUTF2P7-201ENST00000453086 375 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 AC103987.1-201ENST00000473394 348 ntBASIC4.73□□□□□ -1.65
CIITAP33076 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.73□□□□□ -1.65
CIITAP33076 IGLV3-26-201ENST00000520756 302 ntBASIC4.73□□□□□ -1.65
CIITAP33076 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.73□□□□□ -1.65
CIITAP33076 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 NBEAP1-201ENST00000554452 979 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC008015.1-201ENST00000555505 465 ntBASIC4.73□□□□□ -1.65
CIITAP33076 NIFKP8-201ENST00000560500 874 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 AC022655.2-201ENST00000577280 318 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC021749.1-201ENST00000604322 607 ntBASIC4.73□□□□□ -1.65
CIITAP33076 DPRXP5-201ENST00000604662 539 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC064801.1-201ENST00000612025 407 ntBASIC4.73□□□□□ -1.65
CIITAP33076 AC010608.2-201ENST00000624830 470 ntBASIC4.73□□□□□ -1.65
CIITAP33076 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 AC026951.1-201ENST00000559530 2459 ntBASIC4.73□□□□□ -1.65
CIITAP33076 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CIITAP33076 AP005901.5-201ENST00000545779 1796 ntBASIC4.73□□□□□ -1.65
CIITAP33076 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CIITAP33076 RNU6-1339P-201ENST00000363574 91 ntBASIC4.72□□□□□ -1.65
CIITAP33076 Y_RNA.192-201ENST00000363977 102 ntBASIC4.72□□□□□ -1.65
CIITAP33076 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 OR1L1-202ENST00000373686 1083 ntBASIC4.72□□□□□ -1.65
CIITAP33076 ATP5F1P3-201ENST00000397213 657 ntBASIC4.72□□□□□ -1.65
CIITAP33076 RNA5SP317-201ENST00000410176 116 ntBASIC4.72□□□□□ -1.65
CIITAP33076 RNA5SP311-201ENST00000411290 116 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 RPL7P53-201ENST00000421245 739 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 BX119904.4-201ENST00000424402 301 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 AL356276.2-201ENST00000435919 558 ntBASIC4.72□□□□□ -1.65
CIITAP33076 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CIITAP33076 GSTA7P-201ENST00000438425 448 ntBASIC4.72□□□□□ -1.65
CIITAP33076 RPL23AP46-201ENST00000438548 490 ntBASIC4.72□□□□□ -1.65
CIITAP33076 RPL23AP89-201ENST00000439324 255 ntBASIC4.72□□□□□ -1.65
CIITAP33076 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 RPS7P5-201ENST00000441482 581 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 YWHAQP9-201ENST00000445891 512 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 HMGB3P21-201ENST00000452483 547 ntBASIC4.72□□□□□ -1.65
CIITAP33076 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 AC073522.1-201ENST00000483312 377 ntBASIC4.72□□□□□ -1.65
CIITAP33076 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.72□□□□□ -1.65
CIITAP33076 IGBP1P5-201ENST00000507524 1000 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC093824.1-201ENST00000508796 343 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 RNA5SP315-201ENST00000516340 116 ntBASIC4.72□□□□□ -1.65
CIITAP33076 RNA5SP312-201ENST00000517068 116 ntBASIC4.72□□□□□ -1.65
CIITAP33076 IGJP1-201ENST00000522682 475 ntBASIC4.72□□□□□ -1.65
CIITAP33076 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.72□□□□□ -1.65
CIITAP33076 AP003461.1-201ENST00000528866 78 ntBASIC4.72□□□□□ -1.65
CIITAP33076 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CIITAP33076 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.72□□□□□ -1.65
CIITAP33076 AC063950.1-201ENST00000552036 308 ntBASIC4.72□□□□□ -1.65
CIITAP33076 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.72□□□□□ -1.65
CIITAP33076 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 AC090888.1-201ENST00000561335 1141 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.72□□□□□ -1.65
CIITAP33076 MIR3912-201ENST00000577566 105 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.72□□□□□ -1.65
CIITAP33076 AP001542.2-201ENST00000593141 364 ntBASIC4.72□□□□□ -1.65
CIITAP33076 NTAN1P1-201ENST00000603150 646 ntBASIC4.72□□□□□ -1.65
CIITAP33076 MRPS35P3-201ENST00000603189 709 ntBASIC4.72□□□□□ -1.65
CIITAP33076 AC020910.2-201ENST00000603635 610 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms