Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC8P31273 RN7SL271P-201ENST00000487601 295 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC8P31273 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC093853.1-201ENST00000515689 483 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 RN7SKP265-201ENST00000516448 223 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 AC026403.1-201ENST00000518938 295 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC8P31273 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC079171.1-201ENST00000568788 914 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXC8P31273 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC8P31273 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC8P31273 AC024220.1-201ENST00000603675 484 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC8P31273 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC8P31273 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC8P31273 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC8P31273 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC8P31273 AC025263.3-201ENST00000622965 1396 ntBASIC4.39□□□□□ -1.71
HOXC8P31273 AC025125.1-201ENST00000624743 1922 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 ZNF33CP-201ENST00000432492 2030 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 MIR200C-201ENST00000384980 68 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AF228730.1-201ENST00000397972 663 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AL590704.1-201ENST00000402856 794 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 SNORA57.3-201ENST00000411095 141 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC8P31273 SYF2P2-201ENST00000417620 583 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC8P31273 RPS15AP40-201ENST00000419621 391 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 Z97055.1-201ENST00000419730 712 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 RWDD4P2-201ENST00000426392 563 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 ELOCP13-201ENST00000443934 329 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC8P31273 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC091163.3-201ENST00000518269 1144 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 IGJP1-201ENST00000522682 475 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AF279873.1-201ENST00000523393 313 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC015726.1-201ENST00000602353 681 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 AL139286.1-201ENST00000604465 483 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 AC010680.4-201ENST00000605334 543 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 AC009159.2-201ENST00000617603 606 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 AC048344.4-201ENST00000619744 527 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC8P31273 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 SEPT7P7-201ENST00000420492 1301 ntBASIC4.38□□□□□ -1.71
HOXC8P31273 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC8P31273 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC8P31273 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 AC138393.1-206ENST00000540997 1886 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC8P31273 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 SNORD35B-201ENST00000363660 87 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 TMSB4XP8-201ENST00000402089 135 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 TMSB4XP6-201ENST00000415187 135 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC8P31273 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC8P31273 TMSB4XP1-201ENST00000424567 135 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 HMGB1P45-201ENST00000435986 653 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC8P31273 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 CDC42P1-201ENST00000456658 548 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 AC021146.5-201ENST00000503544 545 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms