Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 MIR421-201ENST00000365696 85 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 SNORD17-201ENST00000390930 237 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA9P31269 PRELID3BP11-201ENST00000414230 479 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA9P31269 AC114878.1-201ENST00000441166 358 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AC092809.1-201ENST00000441469 474 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA9P31269 U3.44-201ENST00000458938 192 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 RPL23AP62-201ENST00000463396 453 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 NIPA2P2-201ENST00000496376 1083 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA9P31269 HMGB1P21-201ENST00000502313 581 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AC067904.2-201ENST00000517322 1283 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA9P31269 AC023161.2-201ENST00000551218 780 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA9P31269 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA9P31269 AC007687.1-201ENST00000602704 304 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 HMGB1P51-201ENST00000605166 638 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AL133370.2-201ENST00000619934 439 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
HOXA9P31269 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HOXA9P31269 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA9P31269 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HOXA9P31269 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA9P31269 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA9P31269 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HOXA9P31269 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXA9P31269 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA9P31269 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA9P31269 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA9P31269 SPATA2P1-201ENST00000431223 2055 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA9P31269 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA9P31269 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA9P31269 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA9P31269 RNU6-328P-201ENST00000390887 106 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 DBIP2-201ENST00000419076 262 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 RPL31P45-201ENST00000419532 356 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA9P31269 HSFY1P1-201ENST00000423928 1178 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC005300.1-201ENST00000428401 373 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXA9P31269 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA9P31269 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA9P31269 RPL26P28-201ENST00000451325 435 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC093663.1-201ENST00000497190 394 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 OR5H4P-201ENST00000510851 923 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 RNU6-491P-201ENST00000516099 110 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 RNU2-58P-201ENST00000516403 183 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 RN7SKP82-201ENST00000516786 223 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA9P31269 AP000889.1-201ENST00000530968 660 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
HOXA9P31269 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXA9P31269 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXA9P31269 AC012414.2-201ENST00000559474 187 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA9P31269 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.71□□□□□ -1.82
HOXA9P31269 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA9P31269 AC012467.1-201ENST00000607740 256 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AL355816.1-201ENST00000607951 118 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC091905.1-201ENST00000624400 311 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 AC116563.2-201ENST00000624751 535 ntBASIC3.71□□□□□ -1.82
HOXA9P31269 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA9P31269 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA9P31269 DCAF13P1-201ENST00000495256 1330 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA9P31269 AL589826.1-201ENST00000340697 249 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 RNU1-87P-201ENST00000363727 170 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 SNORA38.1-201ENST00000364172 131 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA9P31269 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 AC013404.1-201ENST00000413068 249 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 OR1AA1P-201ENST00000419597 916 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 RPF2P1-201ENST00000424137 906 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AL445528.1-201ENST00000426330 420 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AL590623.1-201ENST00000427864 105 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 MTCYBP29-201ENST00000436327 1006 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AL138799.3-201ENST00000438968 350 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA9P31269 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA9P31269 RPS29P2-201ENST00000479278 136 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC025518.1-201ENST00000479856 347 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC092451.1-201ENST00000480211 153 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA9P31269 GMPSP1-201ENST00000514075 579 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 MTCO1P30-201ENST00000515244 580 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms