Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CAPN3P20807 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CAPN3P20807 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.4□□□□□ -1.7
CAPN3P20807 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CAPN3P20807 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.4□□□□□ -1.7
CAPN3P20807 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CAPN3P20807 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.4□□□□□ -1.7
CAPN3P20807 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 RNU4-92P-201ENST00000363783 136 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 RNU6-636P-201ENST00000384598 107 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 RNU6-906P-201ENST00000384700 70 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 AC016769.3-201ENST00000396562 315 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 SNRPEP2-201ENST00000397592 279 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 AL356320.2-201ENST00000417263 507 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC062016.2-201ENST00000420950 676 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AL050321.1-201ENST00000432363 400 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 MRPS18BP2-201ENST00000434310 759 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 MTND4P6-201ENST00000438297 472 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 MTND2P20-201ENST00000440805 661 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 NPM1P49-201ENST00000448027 714 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 RPL5P32-201ENST00000454085 879 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC020898.1-201ENST00000474167 787 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 TMED11P-201ENST00000479478 690 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 RPL31P13-201ENST00000484151 370 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 AC111000.3-201ENST00000508057 576 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 ATP1B1P1-201ENST00000509767 915 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC010625.1-201ENST00000511296 403 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
CAPN3P20807 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 AC090695.1-201ENST00000561269 1222 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.4□□□□□ -1.71
CAPN3P20807 MIR4277-201ENST00000578298 84 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.4□□□□□ -1.71
CAPN3P20807 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CAPN3P20807 AC103881.1-201ENST00000603476 538 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 AC009220.3-201ENST00000604318 586 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.4□□□□□ -1.71
CAPN3P20807 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CAPN3P20807 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.4□□□□□ -1.71
CAPN3P20807 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 KARSP3-201ENST00000571212 1504 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 AL365440.1-201ENST00000436135 2167 ntBASIC4.4□□□□□ -1.71
CAPN3P20807 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CAPN3P20807 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
CAPN3P20807 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CAPN3P20807 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.39□□□□□ -1.71
CAPN3P20807 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 AC027287.1-201ENST00000553115 1453 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CAPN3P20807 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CAPN3P20807 AC008033.1-201ENST00000216407 1162 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AC007685.1-201ENST00000329806 452 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 SNORA57.1-201ENST00000391227 145 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.39□□□□□ -1.71
CAPN3P20807 AL591848.1-201ENST00000413092 322 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 RPS7P15-201ENST00000415804 584 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.39□□□□□ -1.71
CAPN3P20807 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.39□□□□□ -1.71
CAPN3P20807 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.39□□□□□ -1.71
CAPN3P20807 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.39□□□□□ -1.71
CAPN3P20807 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CAPN3P20807 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.39□□□□□ -1.71
CAPN3P20807 AC004975.1-201ENST00000428733 208 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.39□□□□□ -1.71
CAPN3P20807 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.39□□□□□ -1.71
CAPN3P20807 AL035246.1-201ENST00000433554 1255 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AL138799.3-201ENST00000438968 350 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.39□□□□□ -1.71
CAPN3P20807 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 VN1R25P-201ENST00000443385 738 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.39□□□□□ -1.71
CAPN3P20807 RPL39P6-201ENST00000448289 150 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 SLC31A1P1-201ENST00000451221 567 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.39□□□□□ -1.71
CAPN3P20807 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.39□□□□□ -1.71
CAPN3P20807 RPL7AP28-201ENST00000464513 571 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AC012158.1-204ENST00000483430 465 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.39□□□□□ -1.71
CAPN3P20807 RPL21P129-201ENST00000491732 478 ntBASIC4.39□□□□□ -1.71
CAPN3P20807 AC108941.1-201ENST00000502853 530 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms