Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 MIR6809-201ENST00000612189 116 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AL138960.1-201ENST00000613838 513 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC090510.2-201ENST00000617465 629 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC007546.1-201ENST00000619452 559 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 AC022418.1-201ENST00000624118 445 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.02□□□□□ -1.45
NFKB1P19838 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NFKB1P19838 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 TRIM51GP-201ENST00000534741 1350 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NFKB1P19838 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
NFKB1P19838 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.02□□□□□ -1.45
NFKB1P19838 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NFKB1P19838 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.01□□□□□ -1.45
NFKB1P19838 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 RNU1-85P-201ENST00000364127 164 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.01□□□□□ -1.45
NFKB1P19838 MIR454-201ENST00000390180 115 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC016769.3-201ENST00000396562 315 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 SNORA11.5-201ENST00000408163 128 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 RN7SKP158-201ENST00000410453 326 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC096632.1-201ENST00000427395 310 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 RPL12P16-201ENST00000431098 498 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC005077.1-201ENST00000449226 375 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 CECR9-201ENST00000453421 199 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 RPL23AP11-201ENST00000475260 469 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC092865.4-201ENST00000477936 615 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC093267.1-201ENST00000489176 961 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC098591.2-201ENST00000510152 315 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 MIR2117-201ENST00000516780 80 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 RNA5SP340-201ENST00000517132 107 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC009902.1-201ENST00000519351 183 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 HMGB1P42-201ENST00000532126 553 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC115085.1-201ENST00000588924 229 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.01□□□□□ -1.45
NFKB1P19838 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.01□□□□□ -1.45
NFKB1P19838 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.01□□□□□ -1.45
NFKB1P19838 ELL2P4-201ENST00000446870 1376 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
NFKB1P19838 AC116158.1-201ENST00000560231 2129 ntBASIC6.01□□□□□ -1.45
NFKB1P19838 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.01□□□□□ -1.45
NFKB1P19838 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6□□□□□ -1.45
NFKB1P19838 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6□□□□□ -1.45
NFKB1P19838 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 MTND5P10-201ENST00000603719 1809 ntBASIC6□□□□□ -1.45
NFKB1P19838 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NFKB1P19838 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6□□□□□ -1.45
NFKB1P19838 AC020656.2-201ENST00000613291 5309 ntBASIC6□□□□□ -1.45
NFKB1P19838 COX6B1P3-201ENST00000312310 260 ntBASIC6□□□□□ -1.45
NFKB1P19838 Y_RNA.149-201ENST00000363558 117 ntBASIC6□□□□□ -1.45
NFKB1P19838 AL121834.1-202ENST00000404494 277 ntBASIC6□□□□□ -1.45
NFKB1P19838 RNU6-985P-201ENST00000410182 104 ntBASIC6□□□□□ -1.45
NFKB1P19838 RPS12P24-201ENST00000412619 387 ntBASIC6□□□□□ -1.45
NFKB1P19838 AC074085.1-201ENST00000413598 418 ntBASIC6□□□□□ -1.45
NFKB1P19838 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6□□□□□ -1.45
NFKB1P19838 AC009302.1-201ENST00000417147 390 ntBASIC6□□□□□ -1.45
NFKB1P19838 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms