Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC111188.2-201ENST00000529697 1387 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 RNU6-1243P-201ENST00000364028 107 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 SNORA70E-201ENST00000384492 135 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 MIR153-1-201ENST00000384914 90 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 RNU4-6P-201ENST00000410804 122 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 JKAMPP1-201ENST00000413804 919 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC011242.1-201ENST00000433596 1158 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 USP9YP7-201ENST00000436723 430 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AL353748.1-201ENST00000440753 474 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 RNF2P1-201ENST00000442955 1010 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 RPS11P1-201ENST00000451072 473 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 BX276092.4-201ENST00000452056 248 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 USP9YP32-201ENST00000452432 430 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC244505.3-201ENST00000454598 187 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFRAP16234 SUMO2P5-201ENST00000506790 245 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC108064.1-201ENST00000513791 460 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFRAP16234 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 MTCYBP28-201ENST00000566728 1132 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFRAP16234 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFRAP16234 LLPHP1-201ENST00000603571 367 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AF129408.1-201ENST00000608767 431 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC128687.2-201ENST00000609657 566 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC093673.2-201ENST00000609674 331 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC024941.1-201ENST00000612250 334 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC233309.1-201ENST00000619522 751 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 AC124312.6-202ENST00000623624 418 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 IQCB2P-201ENST00000401788 1633 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 CASC19-261ENST00000641853 1638 ntBASIC4.19□□□□□ -1.74
PDGFRAP16234 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFRAP16234 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFRAP16234 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDGFRAP16234 EXOC5P1-201ENST00000510543 1969 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDGFRAP16234 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFRAP16234 Y_RNA.126-201ENST00000363382 111 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 RNU6-444P-201ENST00000383988 108 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDGFRAP16234 SNORA57.1-201ENST00000391227 145 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 PPIAP31-201ENST00000405422 495 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 RNU6-575P-201ENST00000411326 105 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 USP9YP21-201ENST00000420603 432 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AC233981.1-201ENST00000423224 461 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 RPL36P19-201ENST00000430744 301 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 Z77249.1-201ENST00000444622 1175 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC104306.1-201ENST00000449702 371 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 HMGN3P1-201ENST00000453847 193 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 HMGB3P30-201ENST00000457863 606 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFRAP16234 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFRAP16234 HNRNPKP5-201ENST00000515300 253 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFRAP16234 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.18□□□□□ -1.74
PDGFRAP16234 OR8K4P-201ENST00000534608 872 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC091516.1-201ENST00000549191 703 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AC087897.1-201ENST00000550134 156 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.18□□□□□ -1.74
PDGFRAP16234 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFRAP16234 AL020997.2-201ENST00000602607 184 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 MIR4496-201ENST00000635896 61 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 AC068620.4-201ENST00000636730 1182 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFRAP16234 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFRAP16234 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFRAP16234 MTND4P9-201ENST00000507819 1346 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
PDGFRAP16234 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFRAP16234 NMD3P1-201ENST00000439704 1488 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms