Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC004024.1-201ENST00000549244 247 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC106785.1-201ENST00000565935 262 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AP000919.1-202ENST00000581139 1264 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AL671309.1-201ENST00000603750 544 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC079880.2-201ENST00000603790 1213 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC083865.1-201ENST00000636634 831 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 AC007390.2-201ENST00000606229 3803 ntBASIC3.2□□□□□ -1.9
HLA-DPB1P04440 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DPB1P04440 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 MTND5P11-201ENST00000511037 1812 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RNA5SP391-201ENST00000363456 119 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RNU6-792P-201ENST00000363490 107 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 ATF1P1-201ENST00000406040 927 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RNA5SP107-201ENST00000411358 122 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 TATDN1P1-201ENST00000414123 891 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RPL37P3-201ENST00000456825 293 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 RN7SKP289-201ENST00000517244 295 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC139103.1-201ENST00000534696 1030 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC023161.2-201ENST00000551218 780 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC090751.1-201ENST00000566966 267 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL450489.1-201ENST00000612071 468 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 MIR6798-201ENST00000612887 67 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC073592.7-201ENST00000623659 507 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC091948.2-201ENST00000636510 279 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 AC095050.2-201ENST00000510748 1458 ntBASIC3.19□□□□□ -1.9
HLA-DPB1P04440 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DPB1P04440 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC007656.2-201ENST00000624902 4547 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 RPL7P60-201ENST00000397636 735 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 GLRXP1-201ENST00000423261 334 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 VN1R42P-201ENST00000424651 344 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 HMGB3P5-201ENST00000428894 612 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AL512661.1-201ENST00000434586 1253 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 RPS20P21-201ENST00000466859 343 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC091959.2-201ENST00000477363 321 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC092045.1-201ENST00000495716 1231 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC108043.1-201ENST00000512696 574 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC008494.2-201ENST00000514544 370 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 OR8K2P-201ENST00000524645 927 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 DUXAP6-201ENST00000553858 601 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AL389895.1-201ENST00000554127 252 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC007424.1-203ENST00000554613 687 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AC067852.4-201ENST00000590314 478 ntBASIC3.18□□□□□ -1.9
HLA-DPB1P04440 AL020997.2-201ENST00000602607 184 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms