Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 SNORD35B-201ENST00000363660 87 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 U1.1-201ENST00000384101 164 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 Y_RNA.500-201ENST00000384466 111 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PDGFBP01127 RNU6-272P-201ENST00000411028 104 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFBP01127 AL161631.1-201ENST00000417933 486 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 AC097713.2-201ENST00000430199 356 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AL158053.1-201ENST00000441503 453 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AC004865.1-201ENST00000442276 1003 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 RNF2P1-201ENST00000442955 1010 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 RPS26P56-201ENST00000444468 240 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 Z77249.1-201ENST00000444622 1175 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 MTND1P33-201ENST00000446251 917 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFBP01127 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 CYCSP20-201ENST00000473154 315 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AL136126.1-201ENST00000473603 402 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 UBE2DNL-203ENST00000474922 222 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AC015724.1-201ENST00000478577 156 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFBP01127 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PDGFBP01127 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 RNU6-488P-201ENST00000515918 99 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 RNU4-60P-201ENST00000517239 135 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AC007424.1-203ENST00000554613 687 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFBP01127 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFBP01127 RPL23AP87-202ENST00000573039 466 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.02□□□□□ -1.77
PDGFBP01127 AL137843.1-201ENST00000605078 385 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 AC112503.2-201ENST00000609005 552 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AP005229.2-201ENST00000609980 697 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AL713922.2-201ENST00000619384 716 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 AL669942.2-201ENST00000620352 697 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 AL392088.2-201ENST00000637607 285 ntBASIC4.02□□□□□ -1.77
PDGFBP01127 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDGFBP01127 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFBP01127 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PDGFBP01127 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFBP01127 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 RNA5SP51-201ENST00000364750 119 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 RNA5SP97-201ENST00000365006 84 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 RNA5SP167-201ENST00000365461 116 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 RNU1-44P-201ENST00000384453 163 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 MIR1250-201ENST00000408098 113 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFBP01127 RN7SKP167-201ENST00000411047 285 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 RPL7P44-201ENST00000424827 742 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 OR51AB1P-201ENST00000429046 620 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 AC006994.1-201ENST00000438212 839 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 RPL23AP33-201ENST00000442301 452 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDGFBP01127 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFBP01127 AP000873.1-201ENST00000463987 400 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 RPL23AP37-201ENST00000479658 549 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 RPL7P23-201ENST00000493874 747 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 RPL5P23-201ENST00000496040 868 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 AC023141.12-201ENST00000512399 199 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.01□□□□□ -1.77
PDGFBP01127 AC068339.2-201ENST00000534395 618 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC135001.1-201ENST00000544546 283 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.01□□□□□ -1.77
PDGFBP01127 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 AC006960.3-201ENST00000561845 705 ntBASIC4.01□□□□□ -1.77
PDGFBP01127 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.01□□□□□ -1.77
PDGFBP01127 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms