Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 RNA5SP97-201ENST00000365006 84 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 DYNLT3P1-201ENST00000378574 347 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 MIR124-3-201ENST00000384866 87 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 RPL21P65-201ENST00000406094 466 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC007899.1-201ENST00000412776 775 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 MTND4P11-201ENST00000417020 1058 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 KRR1P1-201ENST00000419430 803 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 HSFY1P1-201ENST00000423928 1178 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 AL162151.2-201ENST00000448875 158 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 AC010655.1-201ENST00000449336 292 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC012170.1-201ENST00000495139 359 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 ATG10-AS1-201ENST00000504846 648 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.51□□□□□ -1.85
SHOX2O60902 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 AC015726.1-201ENST00000602353 681 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 AL591034.3-201ENST00000605511 685 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOX2O60902 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 AC244100.1-202ENST00000621554 382 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 AC090506.2-201ENST00000624521 419 ntBASIC3.51□□□□□ -1.85
SHOX2O60902 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOX2O60902 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.51□□□□□ -1.85
SHOX2O60902 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOX2O60902 MFSD8-233ENST00000641482 4860 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SHOX2O60902 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SHOX2O60902 DCAF13P3-201ENST00000561147 1334 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AL161912.2-201ENST00000565707 3007 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHOX2O60902 MIR449B-201ENST00000384995 97 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.5□□□□□ -1.85
SHOX2O60902 RN7SKP53-201ENST00000411337 315 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AL356968.1-201ENST00000416622 474 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AC092832.1-201ENST00000422934 400 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AL031663.1-201ENST00000437445 219 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.5□□□□□ -1.85
SHOX2O60902 AC023512.1-201ENST00000444513 499 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 SETD6P1-201ENST00000444575 317 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 TPMTP4-201ENST00000450749 678 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AC091564.1-201ENST00000464563 479 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.5□□□□□ -1.85
SHOX2O60902 RPS27AP1-201ENST00000475545 471 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 GMPSP1-201ENST00000514075 579 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AC119751.5-201ENST00000514077 770 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 RNU6-1308P-201ENST00000516817 103 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 HIGD1AP18-201ENST00000520730 278 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AP001180.3-201ENST00000582221 145 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 ZNF415P1-201ENST00000582279 1166 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOX2O60902 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.5□□□□□ -1.85
SHOX2O60902 RNU4-89P-201ENST00000607443 133 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 MIR7973-1-201ENST00000614683 76 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AC099669.2-201ENST00000616549 437 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.5□□□□□ -1.85
SHOX2O60902 FAM91A3P-201ENST00000456826 2544 ntBASIC3.5□□□□□ -1.85
SHOX2O60902 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHOX2O60902 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHOX2O60902 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHOX2O60902 AC004944.1-201ENST00000517807 3059 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 AL121657.1-201ENST00000327215 531 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHOX2O60902 RNU6-891P-201ENST00000384280 111 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 RN7SKP123-201ENST00000410732 291 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.49□□□□□ -1.85
SHOX2O60902 AC007390.1-201ENST00000415722 356 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 AL356095.1-201ENST00000417217 199 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHOX2O60902 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.49□□□□□ -1.85
SHOX2O60902 NDUFA5P10-201ENST00000432147 357 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHOX2O60902 AC244505.4-201ENST00000434905 287 ntBASIC3.49□□□□□ -1.85
SHOX2O60902 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms