Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 AC107081.3-201ENST00000612715 2034 ntBASIC4.81□□□□□ -1.64
RRP9O43818 RNU6-623P-201ENST00000363143 105 ntBASIC4.81□□□□□ -1.64
RRP9O43818 RNU6-1122P-201ENST00000384449 107 ntBASIC4.81□□□□□ -1.64
RRP9O43818 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 AC119751.6-201ENST00000416712 186 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AL138785.1-201ENST00000425821 331 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 AL353662.1-201ENST00000439099 327 ntBASIC4.81□□□□□ -1.64
RRP9O43818 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 SLC31A1P1-201ENST00000451221 567 ntBASIC4.81□□□□□ -1.64
RRP9O43818 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 AL445669.2-201ENST00000454425 421 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 RPL23AP62-201ENST00000463396 453 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC023194.2-201ENST00000465398 406 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC006517.1-201ENST00000480485 328 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC013828.1-201ENST00000481845 158 ntBASIC4.81□□□□□ -1.64
RRP9O43818 PFN1P8-201ENST00000497012 543 ntBASIC4.81□□□□□ -1.64
RRP9O43818 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.81□□□□□ -1.64
RRP9O43818 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 RNA5SP473-201ENST00000516402 125 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.81□□□□□ -1.64
RRP9O43818 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 RPA2P1-201ENST00000556557 721 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.81□□□□□ -1.64
RRP9O43818 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.81□□□□□ -1.64
RRP9O43818 NF1P5-201ENST00000588287 448 ntBASIC4.81□□□□□ -1.64
RRP9O43818 WISP1-OT1-201ENST00000602893 642 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC069304.2-201ENST00000605154 435 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AL451086.1-201ENST00000605596 223 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC116651.1-201ENST00000609724 556 ntBASIC4.81□□□□□ -1.64
RRP9O43818 MIR6071-201ENST00000616741 78 ntBASIC4.81□□□□□ -1.64
RRP9O43818 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.81□□□□□ -1.64
RRP9O43818 AC087565.3-203ENST00000641018 837 ntBASIC4.81□□□□□ -1.64
RRP9O43818 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RRP9O43818 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RRP9O43818 USP8P1-201ENST00000494673 3183 ntBASIC4.81□□□□□ -1.64
RRP9O43818 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.81□□□□□ -1.64
RRP9O43818 XPOTP1-201ENST00000443317 2398 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC073429.2-201ENST00000569694 1444 ntBASIC4.8□□□□□ -1.64
RRP9O43818 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
RRP9O43818 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RRP9O43818 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RRP9O43818 OR5BR1P-201ENST00000524992 1330 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC092747.4-201ENST00000620519 1861 ntBASIC4.8□□□□□ -1.64
RRP9O43818 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 SNORA70.10-201ENST00000384515 134 ntBASIC4.8□□□□□ -1.64
RRP9O43818 MT-TH-201ENST00000387441 69 ntBASIC4.8□□□□□ -1.64
RRP9O43818 HMGN2P8-201ENST00000391458 268 ntBASIC4.8□□□□□ -1.64
RRP9O43818 RPL23AP29-201ENST00000397284 453 ntBASIC4.8□□□□□ -1.64
RRP9O43818 FABP12P1-201ENST00000401911 322 ntBASIC4.8□□□□□ -1.64
RRP9O43818 CYCSP45-201ENST00000402289 315 ntBASIC4.8□□□□□ -1.64
RRP9O43818 NUDT19P3-201ENST00000404698 555 ntBASIC4.8□□□□□ -1.64
RRP9O43818 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.8□□□□□ -1.64
RRP9O43818 SNORA11.5-201ENST00000408163 128 ntBASIC4.8□□□□□ -1.64
RRP9O43818 USP9YP33-201ENST00000412220 421 ntBASIC4.8□□□□□ -1.64
RRP9O43818 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.8□□□□□ -1.64
RRP9O43818 NPM1P11-201ENST00000417106 855 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 AL022331.1-201ENST00000429025 477 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC010153.1-201ENST00000432862 727 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 USP9YP35-201ENST00000435696 412 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.8□□□□□ -1.64
RRP9O43818 PPIAP27-201ENST00000453800 265 ntBASIC4.8□□□□□ -1.64
RRP9O43818 RPL18AP17-201ENST00000455326 198 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC004801.2-202ENST00000463559 283 ntBASIC4.8□□□□□ -1.64
RRP9O43818 SETP11-201ENST00000473027 690 ntBASIC4.8□□□□□ -1.64
RRP9O43818 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.8□□□□□ -1.64
RRP9O43818 LSM3P4-201ENST00000502948 309 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.8□□□□□ -1.64
RRP9O43818 MTATP6P22-201ENST00000507369 598 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 LTV1P1-201ENST00000510683 1237 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.8□□□□□ -1.64
RRP9O43818 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.8□□□□□ -1.64
RRP9O43818 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.8□□□□□ -1.64
RRP9O43818 OR7K1P-201ENST00000546439 926 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.8□□□□□ -1.64
RRP9O43818 AC007956.1-201ENST00000555623 542 ntBASIC4.8□□□□□ -1.64
RRP9O43818 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms