Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007537.2-201ENST00000472093 511 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 GAPDHP36-201ENST00000480688 918 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 RPL21P131-201ENST00000497298 483 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC016065.2-201ENST00000514530 444 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC105233.3-201ENST00000531125 744 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL049838.1-201ENST00000563647 981 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC006116.5-201ENST00000591936 559 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC105148.1-201ENST00000604961 409 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AC027449.1-201ENST00000608890 407 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 OR6R2P-201ENST00000609216 300 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 MIR6867-201ENST00000610636 67 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 AL157770.1-201ENST00000623049 439 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 MTND5P31-201ENST00000419366 1374 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ELL2P4-201ENST00000446870 1376 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.83□□□□□ -1.8
NPIPA3F8WFD2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 IQCB2P-201ENST00000401788 1633 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 MTND4P10-201ENST00000446199 1363 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 SNORD66.1-201ENST00000391230 76 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 MIR1179-201ENST00000408703 91 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RNU6-584P-201ENST00000410350 95 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 FCF1P2-201ENST00000415284 583 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 SKP1P3-201ENST00000429280 487 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 PSMA2P3-201ENST00000429685 675 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL117339.2-201ENST00000430475 180 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 SEPT7P5-201ENST00000434048 306 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC093155.1-201ENST00000440164 826 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 OR10R1P-201ENST00000441524 1141 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC112492.1-201ENST00000449607 712 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC079776.3-201ENST00000450665 370 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RPS26P28-201ENST00000470806 348 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RPL23AP2-201ENST00000471227 466 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AF213884.1-201ENST00000488102 463 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 STMN1P2-201ENST00000508435 439 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC099522.1-202ENST00000514718 367 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 OR7E13P-201ENST00000526052 910 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC006064.5-201ENST00000541782 248 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 MTND3P13-201ENST00000574391 343 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC090912.3-201ENST00000609775 533 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AL158163.2-201ENST00000619110 700 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC007546.1-201ENST00000619452 559 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA3F8WFD2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms