Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 MTND5P3-201ENST00000438536 1800 ntBASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA2E9PIF3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC025263.3-201ENST00000622965 1396 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RNA5SP52-201ENST00000362448 134 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 CYCSP19-201ENST00000411715 316 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 HMGB3P5-201ENST00000428894 612 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 OR51AB1P-201ENST00000429046 620 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 YWHAZP8-201ENST00000436935 731 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RPL23AP33-201ENST00000442301 452 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RPS26P56-201ENST00000444468 240 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 HMGB3P30-201ENST00000457863 606 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RNU7-140P-201ENST00000459546 60 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RN7SL542P-201ENST00000467147 294 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RPS27P23-201ENST00000487608 251 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC093755.1-201ENST00000512950 1023 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RNU6-416P-201ENST00000516265 103 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 IGJP1-201ENST00000522682 475 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC124293.1-201ENST00000530034 493 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC107016.1-201ENST00000550463 337 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RN7SL703P-201ENST00000578485 302 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC068620.3-201ENST00000602749 560 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AP002906.1-201ENST00000603405 233 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AC090246.1-201ENST00000616499 426 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL121594.5-201ENST00000631724 573 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AL356118.1-201ENST00000635272 1078 ntBASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA2E9PIF3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 RNU5B-1-201ENST00000363286 116 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 SNORD35B-201ENST00000363660 87 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 RN7SKP159-201ENST00000410657 292 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC092638.1-201ENST00000411966 1275 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PGBD4P8-201ENST00000412993 562 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 TAF13P2-201ENST00000416876 286 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PAICSP7-201ENST00000419829 962 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 CKS1BP5-201ENST00000434172 273 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AL645931.1-201ENST00000439737 410 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms