Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MCTS2P-201ENST00000394552 546 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 AL389915.1-201ENST00000422463 466 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 HIGD1AP4-201ENST00000430194 280 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.9□□□□□ -1.95
NACAE9PAV3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.9□□□□□ -1.95
NACAE9PAV3 AC234064.1-201ENST00000436312 247 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 HLA-N-201ENST00000437516 135 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 TPTE2P3-201ENST00000441562 1189 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 VN1R25P-201ENST00000443385 738 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 HMGB3P6-201ENST00000444896 598 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 MRPL42P4-201ENST00000453267 443 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 CDC42P1-201ENST00000456658 548 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 SNORA84-201ENST00000459229 133 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NACAE9PAV3 RPS27AP13-201ENST00000498403 237 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 CDH12P2-201ENST00000504393 298 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NACAE9PAV3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.9□□□□□ -1.95
NACAE9PAV3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.9□□□□□ -1.95
NACAE9PAV3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.9□□□□□ -1.95
NACAE9PAV3 AC110741.2-201ENST00000605278 268 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 RNU4-89P-201ENST00000607443 133 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.9□□□□□ -1.95
NACAE9PAV3 AL355493.4-201ENST00000618530 292 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 MIR8059-201ENST00000620427 81 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 AC015726.3-201ENST00000624501 418 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NACAE9PAV3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
NACAE9PAV3 AC106871.1-201ENST00000568324 3102 ntBASIC2.9□□□□□ -1.95
NACAE9PAV3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.9□□□□□ -1.95
NACAE9PAV3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
NACAE9PAV3 MTCO1P6-201ENST00000481192 1384 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 RNU1-87P-201ENST00000363727 170 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.89□□□□□ -1.95
NACAE9PAV3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 AL136310.1-201ENST00000404926 654 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 PPIAP31-201ENST00000405422 495 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 HMGB3P18-201ENST00000406327 590 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 SNORA11C-201ENST00000408532 129 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 SSR1P2-201ENST00000415208 787 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC009302.1-201ENST00000417147 390 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL356320.2-201ENST00000417263 507 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC073069.1-201ENST00000428657 441 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 RPS24P8-201ENST00000431490 402 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC009263.1-201ENST00000441193 1239 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL589880.1-201ENST00000448271 287 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 RFC5P1-201ENST00000454419 874 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC104687.1-201ENST00000485829 412 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 RPL29P14-201ENST00000495837 428 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 FCF1P3-201ENST00000496394 590 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC020593.1-201ENST00000507399 299 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 snoZ278.1-201ENST00000517059 112 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC124293.1-201ENST00000530034 493 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.89□□□□□ -1.95
NACAE9PAV3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.89□□□□□ -1.95
NACAE9PAV3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AL132857.1-201ENST00000555180 708 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 MTND4P33-201ENST00000556706 766 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC007599.1-201ENST00000568688 1174 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 MIR3912-201ENST00000577566 105 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC245036.5-201ENST00000596330 847 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC125494.3-201ENST00000602759 455 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL137849.1-201ENST00000604767 169 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC090525.3-201ENST00000605601 189 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC004825.2-201ENST00000616634 455 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC006133.1-201ENST00000617106 264 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC039056.2-201ENST00000622261 511 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AL078595.3-201ENST00000623815 1166 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 AL353746.1-201ENST00000566293 6881 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.89□□□□□ -1.95
NACAE9PAV3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NACAE9PAV3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.89□□□□□ -1.95
NACAE9PAV3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 AL355578.1-201ENST00000607405 1328 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 AC104446.1-201ENST00000613728 1321 ntBASIC2.89□□□□□ -1.95
NACAE9PAV3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NACAE9PAV3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms