Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC107934.1-201ENST00000522215 217 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AP006289.1-201ENST00000538089 277 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC008033.2-201ENST00000542626 177 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC123904.3-201ENST00000547218 814 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC011712.1-201ENST00000588959 234 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 KC877982.1-201ENST00000602313 470 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC068831.8-201ENST00000620171 435 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 THAP12P4-201ENST00000528321 2266 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AC009902.3-201ENST00000606235 2172 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 AL451142.2-201ENST00000429076 2090 ntBASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TMEM88BA6NKF7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 SNURFL-201ENST00000309296 343 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC079741.1-201ENST00000321498 212 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 Y_RNA.157-201ENST00000363638 102 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RNY4P16-201ENST00000364768 94 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 SNORA16A-201ENST00000384342 137 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RNU6-178P-201ENST00000384631 104 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RPL7P60-201ENST00000397636 735 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RPS15AP40-201ENST00000419621 391 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 OR2AM1P-201ENST00000422137 422 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC073264.2-201ENST00000448886 166 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AMD1P1-201ENST00000457220 922 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC063943.1-201ENST00000465434 453 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RPS20P21-201ENST00000466859 343 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC105384.2-201ENST00000508433 640 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RN7SKP82-201ENST00000516786 223 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 SCARNA16.4-201ENST00000516956 187 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AL031320.1-201ENST00000604177 357 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AL158211.4-201ENST00000606988 584 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 RNU4-89P-201ENST00000607443 133 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 OR6R2P-201ENST00000609216 300 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AL121757.2-201ENST00000611223 313 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC006504.8-201ENST00000621046 635 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AC130448.2-201ENST00000624082 374 ntBASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TMEM88BA6NKF7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TMEM88BA6NKF7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 RNU1-24P-201ENST00000364285 165 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 Y_RNA.813-201ENST00000364639 102 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 MIR640-201ENST00000385086 96 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 RPL7P58-201ENST00000402913 758 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 RNU2-21P-201ENST00000410368 188 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 ATP5JP1-201ENST00000431631 322 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 CEACAMP1-201ENST00000434624 1035 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AL162739.1-201ENST00000450606 307 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 EIF4A1P11-201ENST00000451239 222 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC092647.2-201ENST00000452998 253 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 MTND1P9-201ENST00000453775 944 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 RPS20P20-201ENST00000460498 340 ntBASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.46□□□□□ -1.38
TMEM88BA6NKF7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms