Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC083865.1-201ENST00000636634 831 ntBASIC2.9□□□□□ -1.95
RBFOX3A6NFN3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RBFOX3A6NFN3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.9□□□□□ -1.95
RBFOX3A6NFN3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.9□□□□□ -1.95
RBFOX3A6NFN3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.9□□□□□ -1.95
RBFOX3A6NFN3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 RNU6-335P-201ENST00000364563 113 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SNORD115-48-201ENST00000364764 76 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SNORD51.1-201ENST00000365405 77 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 HMGB3P18-201ENST00000406327 590 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 ELOCP19-201ENST00000411919 318 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 MTCYBP24-201ENST00000420387 1106 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 RPS29P17-201ENST00000430795 166 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 CBX1P1-201ENST00000440184 427 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 OR9M1P-201ENST00000459641 921 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC073522.1-201ENST00000483312 377 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL132838.2-201ENST00000492041 314 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 KCTD9P5-201ENST00000504141 1170 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SNORA31.9-201ENST00000516429 84 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC138701.1-201ENST00000524329 714 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 OR4R3P-201ENST00000525084 838 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AP000926.4-201ENST00000527351 454 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 TRAV37-201ENST00000553906 342 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 TRAV15-201ENST00000556680 249 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC067805.1-201ENST00000559344 470 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 MIR3690-201ENST00000580266 75 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC023575.1-201ENST00000580510 358 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 YWHAQP7-201ENST00000603536 658 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL445423.1-201ENST00000609941 536 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 MLECP1-201ENST00000615893 709 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 STMN1P1-201ENST00000617809 440 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC022149.2-201ENST00000621061 203 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC110801.1-201ENST00000623590 212 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC024560.2-201ENST00000507981 1497 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AL122126.1-201ENST00000546905 1318 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC007496.3-201ENST00000624987 3443 ntBASIC2.89□□□□□ -1.95
RBFOX3A6NFN3 AC116096.1-201ENST00000566804 2314 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MTND4P8-201ENST00000514997 1362 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC046144.1-201ENST00000478559 1853 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC004972.1-201ENST00000623934 2209 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MTND5P28-201ENST00000438005 1594 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC007823.1-201ENST00000569932 1566 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RNU6-1243P-201ENST00000364028 107 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 SNORA51.2-201ENST00000364595 132 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 SNORA51.12-201ENST00000384448 134 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RNA5SP424-201ENST00000390988 115 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC068533.1-201ENST00000418542 415 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RPL23AP38-201ENST00000423801 469 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 NIPA2P1-201ENST00000426223 976 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC023141.6-201ENST00000429418 337 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MTND4LP14-201ENST00000429447 288 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL513175.1-201ENST00000431492 780 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC114878.1-201ENST00000441166 358 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RPL6P5-201ENST00000445678 828 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 HMGB1P38-201ENST00000490557 577 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC026979.1-201ENST00000492525 396 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms