Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC018552.1-201ENST00000562099 811 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC009117.1-201ENST00000563948 554 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 MTND1P15-201ENST00000579262 949 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC107214.2-201ENST00000608204 634 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 Z99129.1-201ENST00000612510 255 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL356596.1-201ENST00000624230 379 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC231657.1-201ENST00000624313 397 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 U3.53-201ENST00000628922 216 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 OR2L1P-202ENST00000641567 1023 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL079343.1-201ENST00000572358 1771 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 MTCO1P14-201ENST00000441695 1559 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.26□□□□□ -1.73
TRBV5-3A0A0A0MS03 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC009313.2-201ENST00000417893 1941 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 MAPK10-263ENST00000641052 4307 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC021146.4-201ENST00000309229 279 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RNA5SP52-201ENST00000362448 134 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RNU6-433P-201ENST00000363216 104 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 MTCO3P31-201ENST00000405526 789 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL512430.2-201ENST00000406786 339 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RAD23BP2-201ENST00000416003 1207 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 ATG4AP1-201ENST00000416893 538 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC073335.1-201ENST00000427776 363 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL365184.2-201ENST00000431139 435 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RPEP2-201ENST00000432149 701 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RPL37P1-201ENST00000432310 284 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC010881.1-201ENST00000433830 235 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 Z74696.2-201ENST00000436514 498 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 RPL12P11-201ENST00000439970 501 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL357520.1-201ENST00000441557 453 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 OR1H1P-201ENST00000448731 937 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 SEPT7P3-201ENST00000455017 621 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC079804.1-201ENST00000461922 436 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC104763.1-201ENST00000475274 360 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 KLRA1P-201ENST00000503499 986 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 ARL2BPP4-201ENST00000506854 471 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC116347.2-201ENST00000514912 523 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 DUXAP2-201ENST00000519198 589 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 DEFB131D-201ENST00000526803 184 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 SERPINE4P-201ENST00000554978 281 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 MIR4310-201ENST00000582950 57 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC019072.1-201ENST00000604535 1551 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC092794.1-201ENST00000612734 582 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL138721.1-201ENST00000616756 179 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC007546.2-201ENST00000623996 360 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC007342.5-201ENST00000571340 2142 ntBASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRBV5-3A0A0A0MS03 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 AC092079.1-201ENST00000558620 1985 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 OR10J6P-201ENST00000289731 930 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 FGF7P2-201ENST00000332473 296 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 RNU6-723P-201ENST00000383973 107 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 MIR92A2-201ENST00000385299 75 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 SDHCP2-201ENST00000398565 501 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 Z98745.1-201ENST00000402553 494 ntBASIC4.24□□□□□ -1.73
TRBV5-3A0A0A0MS03 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms